Bugfix and test stexaminer help dialog. Fixes #21
[scpubgit/stemmaweb.git] / lib / stemmaweb / Controller / Root.pm
CommitLineData
b8a92065 1package stemmaweb::Controller::Root;
2use Moose;
3use namespace::autoclean;
4use Text::Tradition::Analysis qw/ run_analysis /;
41279a86 5use TryCatch;
16143416 6use XML::LibXML;
7use XML::LibXML::XPathContext;
b8a92065 8
9
10BEGIN { extends 'Catalyst::Controller' }
11
12#
13# Sets the actions in this controller to be registered with no prefix
14# so they function identically to actions created in MyApp.pm
15#
16__PACKAGE__->config(namespace => '');
17
18=head1 NAME
19
20stemmaweb::Controller::Root - Root Controller for stemmaweb
21
22=head1 DESCRIPTION
23
24Serves up the main container pages.
25
26=head1 URLs
27
28=head2 index
29
30The root page (/). Serves the main container page, from which the various
31components will be loaded.
32
33=cut
34
35sub index :Path :Args(0) {
36 my ( $self, $c ) = @_;
37
c655153c 38 # Are we being asked to load a text immediately? If so
39 if( $c->req->param('withtradition') ) {
40 $c->stash->{'withtradition'} = $c->req->param('withtradition');
41 }
b8a92065 42 $c->stash->{template} = 'index.tt';
43}
44
3f9d7ae5 45=head2 about
46
47A general overview/documentation page for the site.
48
49=cut
50
51sub about :Local :Args(0) {
52 my( $self, $c ) = @_;
53 $c->stash->{template} = 'about.tt';
54}
55
4a6b658f 56=head2 help/*
57
58A dispatcher for documentation of various aspects of the application.
59
60=cut
61
62sub help :Local :Args(1) {
63 my( $self, $c, $topic ) = @_;
64 $c->stash->{template} = "$topic.tt";
65}
66
b8a92065 67=head1 Elements of index page
68
69=head2 directory
70
71 GET /directory
72
70ccaf75 73Serves a snippet of HTML that lists the available texts. This returns texts belonging to the logged-in user if any, otherwise it returns all public texts.
b8a92065 74
75=cut
70ccaf75 76
b8a92065 77sub directory :Local :Args(0) {
78 my( $self, $c ) = @_;
79 my $m = $c->model('Directory');
69799996 80 # Is someone logged in?
98a45925 81 my %usertexts;
69799996 82 if( $c->user_exists ) {
83 my $user = $c->user->get_object;
98a45925 84 my @list = $m->traditionlist( $user );
85 map { $usertexts{$_->{id}} = 1 } @list;
86 $c->stash->{usertexts} = \@list;
69799996 87 $c->stash->{is_admin} = 1 if $user->is_admin;
88 }
98a45925 89 # List public (i.e. readonly) texts separately from any user (i.e.
90 # full access) texts that exist. Admin users therefore have nothing
91 # in this list.
92 my @plist = grep { !$usertexts{$_->{id}} } $m->traditionlist('public');
93 $c->stash->{publictexts} = \@plist;
b8a92065 94 $c->stash->{template} = 'directory.tt';
95}
96
75354c3a 97=head1 AJAX methods for traditions and their properties
fb6e49b3 98
75354c3a 99=head2 newtradition
100
101 POST /newtradition,
102 { name: <name>,
103 language: <language>,
104 public: <is_public>,
2ece58b3 105 file: <fileupload> }
fb6e49b3 106
75354c3a 107Creates a new tradition belonging to the logged-in user, with the given name
108and the collation given in the uploaded file. The file type is indicated via
109the filename extension (.csv, .txt, .xls, .xlsx, .xml). Returns the ID and
110name of the new tradition.
111
112=cut
113
114sub newtradition :Local :Args(0) {
115 my( $self, $c ) = @_;
116 return _json_error( $c, 403, 'Cannot save a tradition without being logged in' )
117 unless $c->user_exists;
118
119 my $user = $c->user->get_object;
120 # Grab the file upload, check its name/extension, and call the
121 # appropriate parser(s).
2ece58b3 122 my $upload = $c->request->upload('file');
75354c3a 123 my $name = $c->request->param('name') || 'Uploaded tradition';
124 my $lang = $c->request->param( 'language' ) || 'Default';
125 my $public = $c->request->param( 'public' ) ? 1 : undef;
2ece58b3 126 my( $ext ) = $upload->filename =~ /\.(\w+)$/;
75354c3a 127 my %newopts = (
128 'name' => $name,
129 'language' => $lang,
130 'public' => $public,
2ece58b3 131 'file' => $upload->tempname
75354c3a 132 );
133
134 my $tradition;
135 my $errmsg;
136 if( $ext eq 'xml' ) {
16143416 137 my $type;
138 # Parse the XML to see which flavor it is.
139 my $parser = XML::LibXML->new();
140 my $doc;
141 try {
142 $doc = $parser->parse_file( $newopts{'file'} );
143 } catch( $err ) {
144 $errmsg = "XML file parsing error: $err";
145 }
146 if( $doc ) {
147 if( $doc->documentElement->nodeName eq 'GraphML' ) {
148 $type = 'CollateX';
149 } elsif( $doc->documentElement->nodeName ne 'TEI' ) {
150 $errmsg = 'Unrecognized XML type ' . $doc->documentElement->nodeName;
151 } else {
152 my $xpc = XML::LibXML::XPathContext->new( $doc->documentElement );
153 my $venc = $xpc->findvalue( '/TEI/teiHeader/encodingDesc/variantEncoding/attribute::method' );
154 if( $venc && $venc eq 'double-end-point' ) {
155 $type = 'CTE';
156 } else {
157 $type = 'TEI';
158 }
159 }
160 }
161 # Try the relevant XML parsing option.
162 if( $type ) {
163 delete $newopts{'file'};
164 $newopts{'xmlobj'} = $doc;
75354c3a 165 try {
166 $tradition = Text::Tradition->new( %newopts, 'input' => $type );
167 } catch ( Text::Tradition::Error $e ) {
168 $errmsg = $e->message;
16143416 169 } catch ( $e ) {
170 $errmsg = "Unexpected parsing error: $e";
699ab7ea 171 }
75354c3a 172 }
173 } elsif( $ext =~ /^(txt|csv|xls(x)?)$/ ) {
174 # If it's Excel we need to pass excel => $ext;
175 # otherwise we need to pass sep_char => [record separator].
176 if( $ext =~ /xls/ ) {
177 $newopts{'excel'} = $ext;
178 } else {
179 $newopts{'sep_char'} = $ext eq 'txt' ? "\t" : ',';
180 }
181 try {
182 $tradition = Text::Tradition->new(
183 %newopts,
184 'input' => 'Tabular',
185 );
186 } catch ( Text::Tradition::Error $e ) {
187 $errmsg = $e->message;
16143416 188 } catch ( $e ) {
189 $errmsg = "Unexpected parsing error: $e";
75354c3a 190 }
191 } else {
192 # Error unless we have a recognized filename extension
2bfac197 193 return _json_error( $c, 403, "Unrecognized file type extension $ext" );
75354c3a 194 }
195
196 # Save the tradition if we have it, and return its data or else the
197 # error that occurred trying to make it.
198 if( $errmsg ) {
199 return _json_error( $c, 500, "Error parsing tradition .$ext file: $errmsg" );
200 } elsif( !$tradition ) {
201 return _json_error( $c, 500, "No error caught but tradition not created" );
202 }
203
204 my $m = $c->model('Directory');
205 $user->add_tradition( $tradition );
206 my $id = $c->model('Directory')->store( $tradition );
207 $c->model('Directory')->store( $user );
208 $c->stash->{'result'} = { 'id' => $id, 'name' => $tradition->name };
209 $c->forward('View::JSON');
210}
211
212=head2 textinfo
213
214 GET /textinfo/$textid
215 POST /textinfo/$textid,
216 { name: $new_name,
217 language: $new_language,
218 public: $is_public,
219 owner: $new_userid } # only admin users can update the owner
220
221Returns information about a particular text.
fb6e49b3 222
223=cut
224
75354c3a 225sub textinfo :Local :Args(1) {
fb6e49b3 226 my( $self, $c, $textid ) = @_;
98a45925 227 my $tradition = $c->model('Directory')->tradition( $textid );
6978962f 228 ## Have to keep users in the same scope as tradition
229 my $newuser;
230 my $olduser;
75354c3a 231 unless( $tradition ) {
2bfac197 232 return _json_error( $c, 404, "No tradition with ID $textid" );
75354c3a 233 }
41279a86 234 my $ok = _check_permission( $c, $tradition );
235 return unless $ok;
75354c3a 236 if( $c->req->method eq 'POST' ) {
237 return _json_error( $c, 403,
238 'You do not have permission to update this tradition' )
239 unless $ok eq 'full';
240 my $params = $c->request->parameters;
241 # Handle changes to owner-accessible parameters
242 my $m = $c->model('Directory');
243 my $changed;
ce1c5863 244 # Handle name param - easy
245 if( exists $params->{name} ) {
246 my $newname = delete $params->{name};
247 unless( $tradition->name eq $newname ) {
248 try {
249 $tradition->name( $newname );
75354c3a 250 $changed = 1;
ce1c5863 251 } catch {
252 return _json_error( $c, 500, "Error setting name to $newname" );
75354c3a 253 }
254 }
255 }
ce1c5863 256 # Handle language param, making Default => null
257 my $langval = delete $params->{language} || 'Default';
ed2aaedb 258
259 unless( $tradition->language eq $langval || !$tradition->can('language') ) {
ce1c5863 260 try {
261 $tradition->language( $langval );
262 $changed = 1;
263 } catch {
264 return _json_error( $c, 500, "Error setting language to $langval" );
265 }
266 }
267
75354c3a 268 # Handle our boolean
ce1c5863 269 my $ispublic = $tradition->public;
75354c3a 270 if( delete $params->{'public'} ) { # if it's any true value...
271 $tradition->public( 1 );
ce1c5863 272 $changed = 1 unless $ispublic;
273 } else { # the checkbox was unchecked, ergo it should not be public
274 $tradition->public( 0 );
275 $changed = 1 if $ispublic;
75354c3a 276 }
ce1c5863 277
278 # Handle ownership change
75354c3a 279 if( exists $params->{'owner'} ) {
280 # Only admins can update user / owner
281 my $newownerid = delete $params->{'owner'};
4f849eea 282 unless( !$newownerid ||
6978962f 283 ( $tradition->has_user && $tradition->user->email eq $newownerid ) ) {
75354c3a 284 unless( $c->user->get_object->is_admin ) {
285 return _json_error( $c, 403,
286 "Only admin users can change tradition ownership" );
287 }
6978962f 288 $newuser = $m->find_user({ email => $newownerid });
75354c3a 289 unless( $newuser ) {
ce1c5863 290 return _json_error( $c, 500, "No such user " . $newownerid );
75354c3a 291 }
6978962f 292 if( $tradition->has_user ) {
293 $olduser = $tradition->user;
294 $olduser->remove_tradition( $tradition );
295 }
75354c3a 296 $newuser->add_tradition( $tradition );
297 $changed = 1;
298 }
299 }
300 # TODO check for rogue parameters
301 if( scalar keys %$params ) {
302 my $rogueparams = join( ', ', keys %$params );
303 return _json_error( $c, 403, "Request parameters $rogueparams not recognized" );
304 }
305 # If we safely got to the end, then write to the database.
306 $m->save( $tradition ) if $changed;
307 $m->save( $newuser ) if $newuser;
308 }
41279a86 309
75354c3a 310 # Now return the current textinfo, whether GET or successful POST.
311 my $textinfo = {
312 textid => $textid,
313 name => $tradition->name,
ed2aaedb 314 #language => $tradition->language,
e0b90236 315 public => $tradition->public || 0,
2ece58b3 316 owner => $tradition->user ? $tradition->user->email : undef,
75354c3a 317 witnesses => [ map { $_->sigil } $tradition->witnesses ],
318 };
ed2aaedb 319 if( $tradition->can('language') ) {
320 $textinfo->{'language'} = $tradition->language;
321 }
2923ebb1 322 my @stemmasvg = map { $_->as_svg() } $tradition->stemmata;
75354c3a 323 map { $_ =~ s/\n/ /mg } @stemmasvg;
324 $textinfo->{stemmata} = \@stemmasvg;
325 $c->stash->{'result'} = $textinfo;
326 $c->forward('View::JSON');
fb6e49b3 327}
b8a92065 328
75354c3a 329=head2 variantgraph
b8a92065 330
75354c3a 331 GET /variantgraph/$textid
332
333Returns the variant graph for the text specified at $textid, in SVG form.
b8a92065 334
335=cut
336
75354c3a 337sub variantgraph :Local :Args(1) {
b8a92065 338 my( $self, $c, $textid ) = @_;
98a45925 339 my $tradition = $c->model('Directory')->tradition( $textid );
75354c3a 340 unless( $tradition ) {
2bfac197 341 return _json_error( $c, 404, "No tradition with ID $textid" );
75354c3a 342 }
41279a86 343 my $ok = _check_permission( $c, $tradition );
344 return unless $ok;
345
98a45925 346 my $collation = $tradition->collation;
75354c3a 347 $c->stash->{'result'} = $collation->as_svg;
348 $c->forward('View::SVG');
b8a92065 349}
75354c3a 350
b8a92065 351=head2 stemma
352
75354c3a 353 GET /stemma/$textid/$stemmaseq
354 POST /stemma/$textid/$stemmaseq, { 'dot' => $dot_string }
b8a92065 355
75354c3a 356Returns an SVG representation of the given stemma hypothesis for the text.
357If the URL is called with POST, the stemma at $stemmaseq will be altered
358to reflect the definition in $dot_string. If $stemmaseq is 'n', a new
359stemma will be added.
b8a92065 360
361=cut
362
75354c3a 363sub stemma :Local :Args(2) {
41279a86 364 my( $self, $c, $textid, $stemmaid ) = @_;
b8a92065 365 my $m = $c->model('Directory');
366 my $tradition = $m->tradition( $textid );
75354c3a 367 unless( $tradition ) {
2bfac197 368 return _json_error( $c, 404, "No tradition with ID $textid" );
75354c3a 369 }
41279a86 370 my $ok = _check_permission( $c, $tradition );
371 return unless $ok;
372
41279a86 373 $c->stash->{'result'} = '';
75354c3a 374 my $stemma;
375 if( $c->req->method eq 'POST' ) {
376 if( $ok eq 'full' ) {
41279a86 377 my $dot = $c->request->body_params->{'dot'};
174e78df 378 # Graph::Reader::Dot does not handle bare unicode. We get around this
4770d077 379 # by wrapping all words in double quotes, as long as they aren't already
380 # wrapped, and as long as they aren't the initial 'digraph stemma'.
381 # Horrible HACK.
382 $dot =~ s/(?<!")\b(?!(?:digraph|stemma)\b)(\w+)\b(?!")/"$1"/g;
75354c3a 383 try {
384 if( $stemmaid eq 'n' ) {
385 # We are adding a new stemma.
3f7346b1 386 $stemmaid = $tradition->stemma_count;
75354c3a 387 $stemma = $tradition->add_stemma( 'dot' => $dot );
2bfac197 388 } elsif( $stemmaid !~ /^\d+$/ ) {
389 return _json_error( $c, 403, "Invalid stemma ID specification $stemmaid" );
75354c3a 390 } elsif( $stemmaid < $tradition->stemma_count ) {
391 # We are updating an existing stemma.
392 $stemma = $tradition->stemma( $stemmaid );
393 $stemma->alter_graph( $dot );
394 } else {
395 # Unrecognized stemma ID
2bfac197 396 return _json_error( $c, 404, "No stemma at index $stemmaid, cannot update" );
75354c3a 397 }
398 } catch ( Text::Tradition::Error $e ) {
399 return _json_error( $c, 500, $e->message );
400 }
41279a86 401 $m->store( $tradition );
75354c3a 402 } else {
403 # No permissions to update the stemma
404 return _json_error( $c, 403,
405 'You do not have permission to update stemmata for this tradition' );
41279a86 406 }
b8a92065 407 }
75354c3a 408
409 # For a GET or a successful POST request, return the SVG representation
410 # of the stemma in question, if any.
75354c3a 411 if( !$stemma && $tradition->stemma_count > $stemmaid ) {
412 $stemma = $tradition->stemma( $stemmaid );
413 }
2923ebb1 414 my $stemma_xml = $stemma ? $stemma->as_svg() : '';
ce1c5863 415 # What was requested, XML or JSON?
416 my $return_view = 'SVG';
417 if( my $accept_header = $c->req->header('Accept') ) {
418 $c->log->debug( "Received Accept header: $accept_header" );
419 foreach my $type ( split( /,\s*/, $accept_header ) ) {
420 # If we were first asked for XML, return SVG
421 last if $type =~ /^(application|text)\/xml$/;
422 # If we were first asked for JSON, return JSON
423 if( $type eq 'application/json' ) {
424 $return_view = 'JSON';
425 last;
426 }
427 }
428 }
429 if( $return_view eq 'SVG' ) {
430 $c->stash->{'result'} = $stemma_xml;
431 $c->forward('View::SVG');
432 } else { # JSON
433 $stemma_xml =~ s/\n/ /mg;
434 $c->stash->{'result'} = { 'stemmaid' => $stemmaid, 'stemmasvg' => $stemma_xml };
435 $c->forward('View::JSON');
436 }
b8a92065 437}
438
439=head2 stemmadot
440
75354c3a 441 GET /stemmadot/$textid/$stemmaseq
b8a92065 442
443Returns the 'dot' format representation of the current stemma hypothesis.
444
445=cut
446
75354c3a 447sub stemmadot :Local :Args(2) {
448 my( $self, $c, $textid, $stemmaid ) = @_;
b8a92065 449 my $m = $c->model('Directory');
450 my $tradition = $m->tradition( $textid );
75354c3a 451 unless( $tradition ) {
2bfac197 452 return _json_error( $c, 404, "No tradition with ID $textid" );
75354c3a 453 }
41279a86 454 my $ok = _check_permission( $c, $tradition );
455 return unless $ok;
75354c3a 456 my $stemma = $tradition->stemma( $stemmaid );
457 unless( $stemma ) {
2bfac197 458 return _json_error( $c, 404, "Tradition $textid has no stemma ID $stemmaid" );
75354c3a 459 }
460 # Get the dot and transmute its line breaks to literal '|n'
461 $c->stash->{'result'} = { 'dot' => $stemma->editable( { linesep => '|n' } ) };
41279a86 462 $c->forward('View::JSON');
463}
464
38627d20 465=head2 download
466
467 GET /download/$textid
468
469Returns the full XML definition of the tradition and its stemmata, if any.
470
471=cut
472
473sub download :Local :Args(1) {
474 my( $self, $c, $textid ) = @_;
475 my $tradition = $c->model('Directory')->tradition( $textid );
476 unless( $tradition ) {
477 return _json_error( $c, 404, "No tradition with ID $textid" );
478 }
479 my $ok = _check_permission( $c, $tradition );
480 return unless $ok;
481 try {
482 $c->stash->{'result'} = $tradition->collation->as_graphml();
483 } catch( Text::Tradition::Error $e ) {
484 return _json_error( $c, 500, $e->message );
485 }
486 $c->forward('View::GraphML');
487}
488
75354c3a 489####################
490### Helper functions
491####################
41279a86 492
75354c3a 493# Helper to check what permission, if any, the active user has for
494# the given tradition
41279a86 495sub _check_permission {
496 my( $c, $tradition ) = @_;
497 my $user = $c->user_exists ? $c->user->get_object : undef;
498 if( $user ) {
929ba7c8 499 return 'full' if ( $user->is_admin ||
500 ( $tradition->has_user && $tradition->user->id eq $user->id ) );
080f8a02 501 }
502 # Text doesn't belong to us, so maybe it's public?
503 return 'readonly' if $tradition->public;
504
505 # ...nope. Forbidden!
75354c3a 506 return _json_error( $c, 403, 'You do not have permission to view this tradition.' );
507}
508
509# Helper to throw a JSON exception
510sub _json_error {
511 my( $c, $code, $errmsg ) = @_;
512 $c->response->status( $code );
513 $c->stash->{'result'} = { 'error' => $errmsg };
514 $c->forward('View::JSON');
929ba7c8 515 return 0;
41279a86 516}
517
b8a92065 518=head2 default
519
520Standard 404 error page
521
522=cut
523
524sub default :Path {
525 my ( $self, $c ) = @_;
526 $c->response->body( 'Page not found' );
527 $c->response->status(404);
528}
529
530=head2 end
531
532Attempt to render a view, if needed.
533
534=cut
535
536sub end : ActionClass('RenderView') {}
537
538=head1 AUTHOR
539
540Tara L Andrews
541
542=head1 LICENSE
543
544This library is free software. You can redistribute it and/or modify
545it under the same terms as Perl itself.
546
547=cut
548
549__PACKAGE__->meta->make_immutable;
550
5511;