# objects themselves.
my( $kept, $deleted, $combine, $combine_char ) = $self->_stringify_args( @_ );
$self->_graphcalc_done(0);
-
+
# The kept reading should inherit the paths and the relationships
# of the deleted reading.
foreach my $path ( $self->sequence->edges_at( $deleted ) ) {
@wits{keys %$fwits} = values %$fwits;
$self->sequence->set_edge_attributes( @vector, \%wits );
}
- $self->relations->merge_readings( $kept, $deleted, $combine_char );
+ $self->relations->merge_readings( $kept, $deleted, $combine );
# Do the deletion deed.
if( $combine ) {
throw( "Need GraphViz installed to output SVG" )
unless File::Which::which( 'dot' );
my $want_subgraph = exists $opts->{'from'} || exists $opts->{'to'};
- $self->calculate_ranks() unless( $self->_graphcalc_done || $opts->{'nocalc'} );
+ $self->calculate_ranks()
+ unless( $self->_graphcalc_done || $opts->{'nocalc'} || !$self->linear );
if( !$self->has_cached_svg || $opts->{'recalc'} || $want_subgraph ) {
my @cmd = qw/dot -Tsvg/;
my( $svg, $err );
# Output substitute start/end readings if necessary
if( $startrank ) {
- $dot .= "\t\"#SUBSTART#\" [ label=\"...\" ];\n";
+ $dot .= "\t\"__SUBSTART__\" [ label=\"...\",id=\"__START__\" ];\n";
}
if( $endrank ) {
- $dot .= "\t\"#SUBEND#\" [ label=\"...\" ];\n";
+ $dot .= "\t\"__SUBEND__\" [ label=\"...\",id=\"__END__\" ];\n";
}
if( $STRAIGHTENHACK ) {
## HACK part 1
- my $startlabel = $startrank ? 'SUBSTART' : 'START';
- $dot .= "\tsubgraph { rank=same \"#$startlabel#\" \"#SILENT#\" }\n";
+ my $startlabel = $startrank ? '__SUBSTART__' : '__START__';
+ $dot .= "\tsubgraph { rank=same \"$startlabel\" \"#SILENT#\" }\n";
$dot .= "\t\"#SILENT#\" [ shape=diamond,color=white,penwidth=0,label=\"\" ];"
}
my %used; # Keep track of the readings that actually appear in the graph
$label = "-$label" if $reading->join_prior;
$label =~ s/\"/\\\"/g;
$rattrs->{'label'} = $label;
+ $rattrs->{'id'} = $reading->id;
$rattrs->{'fillcolor'} = '#b3f36d' if $reading->is_common && $color_common;
$dot .= sprintf( "\t\"%s\" %s;\n", $reading->id, _dot_attr_string( $rattrs ) );
}
my $witstr = $self->_path_display_label ( $self->reading_witnesses( $self->reading( $node ) ) );
my $variables = { %edge_attrs, 'label' => $witstr };
my $varopts = _dot_attr_string( $variables );
- $dot .= "\t\"#SUBSTART#\" -> \"$node\" $varopts;";
+ $dot .= "\t\"__SUBSTART__\" -> \"$node\" $varopts;";
}
foreach my $node ( keys %subend ) {
my $witstr = $self->_path_display_label ( $self->reading_witnesses( $self->reading( $node ) ) );
my $variables = { %edge_attrs, 'label' => $witstr };
my $varopts = _dot_attr_string( $variables );
- $dot .= "\t\"$node\" -> \"#SUBEND#\" $varopts;";
+ $dot .= "\t\"$node\" -> \"__SUBEND__\" $varopts;";
}
# HACK part 2
if( $STRAIGHTENHACK ) {
- my $endlabel = $endrank ? 'SUBEND' : 'END';
- $dot .= "\t\"#$endlabel#\" -> \"#SILENT#\" [ color=white,penwidth=0 ];\n";
+ my $endlabel = $endrank ? '__SUBEND__' : '__END__';
+ $dot .= "\t\"$endlabel\" -> \"#SILENT#\" [ color=white,penwidth=0 ];\n";
}
$dot .= "}\n";
# See if we are in a majority situation.
my $maj = scalar( $self->tradition->witnesses ) * 0.6;
+ $maj = $maj > 5 ? $maj : 5;
if( scalar keys %wits > $maj ) {
unshift( @disp_ac, 'majority' );
return join( ', ', @disp_ac );
is( scalar $st->collation->paths, $PATHS, "Reparsed collation has all paths" );
is( scalar $st->collation->relationships, 3, "Reparsed collation has new relationships" );
+# Now add a stemma, write to GraphML, and parse again.
+my $stemma = $tradition->add_stemma( 'dotfile' => 't/data/florilegium.dot' );
+is( ref( $stemma ), 'Text::Tradition::Stemma', "Parsed dotfile into stemma" );
+is( $tradition->stemmata, 1, "Tradition now has the stemma" );
+$graphml = $c->as_graphml;
+like( $graphml, qr/digraph/, "Digraph declaration exists in GraphML" );
+
=end testing
=cut
'Str' => 'string',
'Int' => 'int',
'Bool' => 'boolean',
+ 'ReadingID' => 'string',
'RelationshipType' => 'string',
'RelationshipScope' => 'string',
);
next unless $save_types{$attr->type_constraint->name};
$graph_attributes{$attr->name} = $save_types{$attr->type_constraint->name};
}
+ # Extra custom key for the tradition stemma(ta)
+ $graph_attributes{'stemmata'} = 'string';
foreach my $datum ( sort keys %graph_attributes ) {
$graph_data_keys{$datum} = 'dg'.$gdi++;
next unless $save_types{$attr->type_constraint->name};
$reading_attributes{$attr->name} = $save_types{$attr->type_constraint->name};
}
+ # Extra custom key for the reading morphology
+ $reading_attributes{'lexemes'} = 'string';
+
my %node_data_keys;
my $ndi = 0;
foreach my $datum ( sort keys %reading_attributes ) {
$sgraph->setAttribute( 'parse.nodes', 0 ); # fill in later
$sgraph->setAttribute( 'parse.order', 'nodesfirst' );
- # Collation attribute data
+ # Tradition/collation attribute data
foreach my $datum ( keys %graph_attributes ) {
my $value;
if( $datum eq 'version' ) {
- $value = '3.1';
+ $value = '3.2';
+ } elsif( $datum eq 'stemmata' ) {
+ my @stemstrs;
+ map { push( @stemstrs, $_->editable( {linesep => ''} ) ) }
+ $self->tradition->stemmata;
+ $value = join( "\n", @stemstrs );
} elsif( $gattr_from{$datum} eq 'Tradition' ) {
$value = $self->tradition->$datum;
} else {
$node_el->setAttribute( 'id', $node_xmlid );
foreach my $d ( keys %reading_attributes ) {
my $nval = $n->$d;
+ # Custom serialization
+ if( $d eq 'lexemes' ) {
+ # If nval is a true value, we have lexemes so we need to
+ # serialize them. Otherwise set nval to undef so that the
+ # key is excluded from this reading.
+ $nval = $nval ? $n->_serialize_lexemes : undef;
+ }
if( $rankoffset && $d eq 'rank' && $n ne $self->start ) {
# Adjust the ranks within the subgraph.
$nval = $n eq $self->end ? $end->rank - $rankoffset + 1
is( $c->common_predecessor( 'n24', 'n23' )->id,
'n20', "Found correct common predecessor" );
is( $c->common_successor( 'n24', 'n23' )->id,
- '#END#', "Found correct common successor" );
+ '__END__', "Found correct common successor" );
is( $c->common_predecessor( 'n19', 'n17' )->id,
'n16', "Found correct common predecessor for readings on same path" );
is( $c->common_successor( 'n21', 'n10' )->id,
- '#END#', "Found correct common successor for readings on same path" );
+ '__END__', "Found correct common successor for readings on same path" );
=end testing
projects / scpubgit/stemmatology.git / blobdiff