12 years agoignoring t/var which is where the tests store temp data
Eden Cardim [Thu, 10 May 2012 22:58:09 +0000]
ignoring t/var which is where the tests store temp data

12 years agoupdating benchmark values
Eden Cardim [Thu, 10 May 2012 22:57:48 +0000]
updating benchmark values

12 years agoadded benchmark times/fixed bug in test
Eden Cardim [Thu, 10 May 2012 22:36:52 +0000]
added benchmark times/fixed bug in test

12 years agofixing test results data structure
Eden Cardim [Thu, 10 May 2012 22:30:39 +0000]
fixing test results data structure

12 years agoAdd a script to update the speed load test data when changes are made to how data...
Jess Robinson [Thu, 3 May 2012 10:02:42 +0000]
Add a script to update the speed load test data when changes are made to how data is stored

12 years agoMerge branch 'performance' of https://github.com/tla/stemmatology into performance
Jess Robinson [Thu, 3 May 2012 08:56:31 +0000]
Merge branch 'performance' of https://github.com/tla/stemmatology into performance

Conflicts:
t/data/load-save-benchmark.json

12 years agousing YAML-based collapser
Eden Cardim [Wed, 2 May 2012 15:18:51 +0000]
using YAML-based collapser

12 years agoload-save benchmark data for sherlock
Jess Robinson [Tue, 1 May 2012 14:00:18 +0000]
load-save benchmark data for sherlock

12 years agoAmended to store/use benchmarking data profiles per host
Jess Robinson [Tue, 1 May 2012 13:58:59 +0000]
Amended to store/use benchmarking data profiles per host

12 years agoOnly run the load-save test manually, skip for make/prove
Jess Robinson [Tue, 1 May 2012 11:29:13 +0000]
Only run the load-save test manually, skip for make/prove

12 years agoFixup the save-load test to store the benchmark results properly.. (well better,...
Jess Robinson [Mon, 30 Apr 2012 14:21:27 +0000]
Fixup the save-load test to store the benchmark results properly.. (well better, anyway)

12 years agoInitial version of performance test
Jess Robinson [Mon, 30 Apr 2012 13:32:22 +0000]
Initial version of performance test

12 years agopass $self to a method call, oops
Tara L Andrews [Wed, 25 Apr 2012 12:46:28 +0000]
pass $self to a method call, oops

12 years agomake French morph tagging work; dependent on Flemm and TreeTagger
Tara L Andrews [Wed, 25 Apr 2012 12:40:23 +0000]
make French morph tagging work; dependent on Flemm and TreeTagger

12 years agostart implementing morphology on readings
Tara L Andrews [Mon, 23 Apr 2012 14:06:57 +0000]
start implementing morphology on readings

12 years agofix bugs in persistent equivalence graph implementation
Tara L Andrews [Sat, 21 Apr 2012 21:09:37 +0000]
fix bugs in persistent equivalence graph implementation

12 years agoavoid collating meta readings
Tara L Andrews [Sat, 21 Apr 2012 20:45:29 +0000]
avoid collating meta readings

12 years agoimplement persistent equivalence graph for relationship tracking
Tara L Andrews [Sat, 21 Apr 2012 13:07:49 +0000]
implement persistent equivalence graph for relationship tracking

12 years agocheck for relationship before collating
Tara L Andrews [Fri, 20 Apr 2012 17:13:35 +0000]
check for relationship before collating

12 years agofix relationship test data; remove print from tab test
Tara L Andrews [Fri, 20 Apr 2012 12:43:14 +0000]
fix relationship test data; remove print from tab test

12 years agofix graphml subgraph generation; fix tab parsing to only set 'collated' where needed...
Tara L Andrews [Fri, 20 Apr 2012 12:33:01 +0000]
fix graphml subgraph generation; fix tab parsing to only set 'collated' where needed; add so-far-untried tests for transposition

12 years agoadd some more transposition logic
Tara L Andrews [Fri, 20 Apr 2012 08:20:44 +0000]
add some more transposition logic

12 years agofix exponential loop in common_in_path
Tara L Andrews [Fri, 20 Apr 2012 08:20:31 +0000]
fix exponential loop in common_in_path

12 years agorequire working version of Text::TEI::Markup
Tara L Andrews [Fri, 20 Apr 2012 08:19:56 +0000]
require working version of Text::TEI::Markup

12 years agoworkaround for segfault; slightly poor form GraphML but who cares?
Tara L Andrews [Thu, 19 Apr 2012 23:14:17 +0000]
workaround for segfault; slightly poor form GraphML but who cares?

12 years agooverhaul of colocated-relationship validation, still segfaulting
Tara L Andrews [Thu, 19 Apr 2012 22:56:49 +0000]
overhaul of colocated-relationship validation, still segfaulting

12 years agofactor out equivalence graph creation
Tara L Andrews [Thu, 19 Apr 2012 14:36:41 +0000]
factor out equivalence graph creation

12 years agoadd failing tests for relationship logic, next we fix them
Tara L Andrews [Thu, 19 Apr 2012 14:01:01 +0000]
add failing tests for relationship logic, next we fix them

12 years agoadd -from and -to options; TODO rationalize these across outputs
Tara L Andrews [Thu, 19 Apr 2012 13:42:44 +0000]
add -from and -to options; TODO rationalize these across outputs

12 years agorevert untested changes that were causing a segfault
Tara L Andrews [Thu, 19 Apr 2012 13:42:15 +0000]
revert untested changes that were causing a segfault

12 years agoMerge branch 'master' of github.com:tla/stemmatology
Tara L Andrews [Thu, 19 Apr 2012 12:22:17 +0000]
Merge branch 'master' of github.com:tla/stemmatology

12 years agoenable graphml export of partial traditions
Tara L Andrews [Thu, 19 Apr 2012 12:22:09 +0000]
enable graphml export of partial traditions

12 years agoreplace local with global rel if they are equivalent anyway
Tara L Andrews [Thu, 19 Apr 2012 12:14:42 +0000]
replace local with global rel if they are equivalent anyway

12 years agoUNTESTED better validation for transpositions
Tara L Andrews [Thu, 19 Apr 2012 09:49:39 +0000]
UNTESTED better validation for transpositions

12 years agowrap documentation strings
Tara L Andrews [Thu, 19 Apr 2012 09:48:14 +0000]
wrap documentation strings

12 years agoavoid dying on relationship conflicts
Tara L Andrews [Thu, 19 Apr 2012 09:47:55 +0000]
avoid dying on relationship conflicts

12 years agofix failing stemmaweb stub test
Tara L Andrews [Wed, 18 Apr 2012 21:04:41 +0000]
fix failing stemmaweb stub test

12 years agofix bug in transposition validation
Tara L Andrews [Wed, 18 Apr 2012 19:15:24 +0000]
fix bug in transposition validation

12 years agodrop collations on global relationship setting too
Tara L Andrews [Wed, 18 Apr 2012 18:17:46 +0000]
drop collations on global relationship setting too

12 years agosuppress undefined warnings in cycle death
Tara L Andrews [Wed, 18 Apr 2012 18:17:29 +0000]
suppress undefined warnings in cycle death

12 years agobump version numbers
Tara L Andrews [Wed, 18 Apr 2012 14:27:45 +0000]
bump version numbers

12 years agofix failing tests
Tara L Andrews [Wed, 18 Apr 2012 12:30:09 +0000]
fix failing tests

12 years agoretain original order of collation sets
Tara L Andrews [Wed, 18 Apr 2012 12:30:02 +0000]
retain original order of collation sets

12 years agoremove deprecated source attribute
tla [Wed, 18 Apr 2012 10:15:11 +0000]
remove deprecated source attribute

12 years agorelationship deletions should include scoped objects
tla [Wed, 18 Apr 2012 10:14:52 +0000]
relationship deletions should include scoped objects

12 years agoMerge branch 'master' of github.com:tla/stemmatology
tla [Tue, 17 Apr 2012 11:40:21 +0000]
Merge branch 'master' of github.com:tla/stemmatology

12 years agoaccessor method for fixing a database bug
tla [Tue, 17 Apr 2012 11:39:47 +0000]
accessor method for fixing a database bug

12 years agoMerge branch 'master' of github.com:tla/stemmatology
Tara L Andrews [Tue, 17 Apr 2012 11:24:03 +0000]
Merge branch 'master' of github.com:tla/stemmatology

Conflicts:
lib/Text/Tradition/Parser/CTE.pm

12 years agobetter handling of CTE files and their annoying hilight elements
Tara L Andrews [Tue, 17 Apr 2012 11:21:47 +0000]
better handling of CTE files and their annoying hilight elements

12 years agoonly collate a given sequence once
Tara L Andrews [Tue, 17 Apr 2012 11:21:16 +0000]
only collate a given sequence once

12 years agoadd nocalc option for debug svg output
Tara L Andrews [Tue, 17 Apr 2012 11:20:58 +0000]
add nocalc option for debug svg output

12 years agorestore legacy attribute until we can remove it from db records
Tara L Andrews [Tue, 17 Apr 2012 08:47:11 +0000]
restore legacy attribute until we can remove it from db records

12 years agohousekeeping, a bit of POD addition
Tara L Andrews [Tue, 17 Apr 2012 08:22:38 +0000]
housekeeping, a bit of POD  addition

12 years agomake XML witness parsing work
Tara L Andrews [Mon, 16 Apr 2012 09:27:27 +0000]
make XML witness parsing work

12 years agomake the rest of the tests work with the new Witness
Tara L Andrews [Sun, 15 Apr 2012 22:02:13 +0000]
make the rest of the tests work with the new Witness

12 years agoMerge branch 'master' into witnessparse
Tara L Andrews [Sun, 15 Apr 2012 21:56:22 +0000]
Merge branch 'master' into witnessparse

12 years agoMerge branch 'master' of github.com:tla/stemmatology
Tara L Andrews [Sun, 15 Apr 2012 21:53:53 +0000]
Merge branch 'master' of github.com:tla/stemmatology

12 years agoremove refs to deprecated relationship type 'meaning'
Tara L Andrews [Sun, 15 Apr 2012 21:53:36 +0000]
remove refs to deprecated relationship type 'meaning'

12 years agoset text/layertext from witness JSON parse
Tara L Andrews [Sun, 15 Apr 2012 21:31:34 +0000]
set text/layertext from witness JSON parse

12 years agoget JSON witness parsing to work
Tara L Andrews [Sun, 15 Apr 2012 21:29:22 +0000]
get JSON witness parsing to work

12 years agomake witness plaintext parsing work
Tara L Andrews [Sun, 15 Apr 2012 21:15:18 +0000]
make witness plaintext parsing work

12 years agomake relationship mapper segments adapt to node+edge size of graph
Tara L Andrews [Fri, 13 Apr 2012 20:16:54 +0000]
make relationship mapper segments adapt to node+edge size of graph

12 years agomake phylo tree generation work with script
Tara L Andrews [Fri, 13 Apr 2012 19:25:27 +0000]
make phylo tree generation work with script

12 years agoonly use applicable a.c. witnesses in stemma for analysis
Tara L Andrews [Thu, 12 Apr 2012 11:42:28 +0000]
only use applicable a.c. witnesses in stemma for analysis

12 years agofix a.c. handling on empty lemmata
Tara L Andrews [Thu, 12 Apr 2012 11:42:04 +0000]
fix a.c. handling on empty lemmata

12 years agoremove 'meaning' relationship from interface too
Tara L Andrews [Sun, 8 Apr 2012 21:10:40 +0000]
remove 'meaning' relationship from interface too

12 years agoremove 'meaning' relationship; apply fix to make ellipse text draggable
Tara L Andrews [Sun, 8 Apr 2012 13:11:59 +0000]
remove 'meaning' relationship; apply fix to make ellipse text draggable

12 years agoremove HACK from tradition build script
Tara L Andrews [Sun, 8 Apr 2012 12:44:51 +0000]
remove HACK from tradition build script

12 years agosegment the large texts in the relationship mapper
Tara L Andrews [Sun, 8 Apr 2012 11:57:23 +0000]
segment the large texts in the relationship mapper

12 years agoadd rudimentary logic for text segmentation in lemmatizer
Tara L Andrews [Sat, 7 Apr 2012 23:55:48 +0000]
add rudimentary logic for text segmentation in lemmatizer

12 years agobeginnings of addition of statistical info to stexaminer
Tara L Andrews [Fri, 6 Apr 2012 22:55:15 +0000]
beginnings of addition of statistical info to stexaminer

12 years agobetter handling of a.c. witnesses in analysis
Tara L Andrews [Fri, 6 Apr 2012 21:42:48 +0000]
better handling of a.c. witnesses in analysis

12 years agodo proper quoting of unusual entity names in the dot
Tara L Andrews [Fri, 6 Apr 2012 21:40:36 +0000]
do proper quoting of unusual entity names in the dot

12 years agotest for correctness of analysis groups; pursuant bugfixes
Tara L Andrews [Fri, 6 Apr 2012 20:37:09 +0000]
test for correctness of analysis groups; pursuant bugfixes

12 years agomake path labels do the right thing with a.c. witnesses
Tara L Andrews [Fri, 6 Apr 2012 20:36:40 +0000]
make path labels do the right thing with a.c. witnesses

12 years agobugfix in directory test script
Tara L Andrews [Fri, 6 Apr 2012 20:34:47 +0000]
bugfix in directory test script

12 years agorefrain from counting hypotheticals in groups; fix bugs relating to array skew
Tara L Andrews [Fri, 6 Apr 2012 10:34:59 +0000]
refrain from counting hypotheticals in groups; fix bugs relating to array skew

12 years agoonly show 'interesting' variants in the stexaminer; send only witnesses
Tara L Andrews [Fri, 16 Mar 2012 10:54:35 +0000]
only show 'interesting' variants in the stexaminer; send only witnesses
present in the stemma to the solvers

12 years agoallow lookup by name as well as ID
Tara L Andrews [Fri, 16 Mar 2012 08:05:25 +0000]
allow lookup by name as well as ID

12 years agoMerge branch 'master' of github.com:tla/stemmatology
tla [Thu, 15 Mar 2012 10:03:29 +0000]
Merge branch 'master' of github.com:tla/stemmatology

12 years agoadd work-in-progress overlay, fix position of dialog overlay
Tara L Andrews [Wed, 14 Mar 2012 23:25:16 +0000]
add work-in-progress overlay, fix position of dialog overlay

12 years agoMerge branch 'master' of github.com:tla/stemmatology
tla [Wed, 14 Mar 2012 22:17:08 +0000]
Merge branch 'master' of github.com:tla/stemmatology

12 years agoreverting accidental file commits
Tara L Andrews [Wed, 14 Mar 2012 16:41:05 +0000]
reverting accidental file commits

12 years agoMerge branch 'master' of github.com:tla/stemmatology
Tara L Andrews [Wed, 14 Mar 2012 16:34:02 +0000]
Merge branch 'master' of github.com:tla/stemmatology

12 years agoCollateX format for GraphML output changed; parser update
Tara L Andrews [Wed, 14 Mar 2012 14:36:16 +0000]
CollateX format for GraphML output changed; parser update

12 years agofix various bugs
tla [Wed, 14 Mar 2012 16:11:50 +0000]
fix various bugs

12 years agosome debugger-friendly params
tla [Wed, 14 Mar 2012 16:11:26 +0000]
some debugger-friendly params

12 years agoproperly display & scale stemma graphs
tla [Wed, 14 Mar 2012 15:20:41 +0000]
properly display & scale stemma graphs

12 years agoCollateX format for GraphML output changed; parser update
Tara L Andrews [Wed, 14 Mar 2012 14:36:16 +0000]
CollateX format for GraphML output changed; parser update

12 years agoreplace collation relationships whenever we can
Tara L Andrews [Wed, 14 Mar 2012 11:33:49 +0000]
replace collation relationships whenever we can

12 years agochange pt to px in stemma graphic
Tara L Andrews [Wed, 14 Mar 2012 11:33:21 +0000]
change pt to px in stemma graphic

12 years agoreconfigure stexaminer layout
Tara L Andrews [Mon, 12 Mar 2012 15:45:06 +0000]
reconfigure stexaminer layout

12 years agoPrune the groupings we get back from IDP
Tara L Andrews [Mon, 12 Mar 2012 15:44:42 +0000]
Prune the groupings we get back from IDP

12 years agouse the straighten hack whenever explicitly specified, subgraph or no
Tara L Andrews [Mon, 12 Mar 2012 15:43:45 +0000]
use the straighten hack whenever explicitly specified, subgraph or no

12 years agoMerge branch 'master' of github.com:tla/stemmatology
Tara L Andrews [Sat, 10 Mar 2012 21:37:53 +0000]
Merge branch 'master' of github.com:tla/stemmatology

12 years agoadd JSON export function
Tara L Andrews [Sat, 10 Mar 2012 21:37:40 +0000]
add JSON export function

12 years agomake text_from_paths actually work
Tara L Andrews [Sat, 10 Mar 2012 21:37:30 +0000]
make text_from_paths actually work

12 years agodon't include 'collated' relationships in viewer
Tara L Andrews [Wed, 7 Mar 2012 15:18:00 +0000]
don't include 'collated' relationships in viewer

12 years agodon't error on relationship deletion no-op
Tara L Andrews [Wed, 7 Mar 2012 12:47:12 +0000]
don't error on relationship deletion no-op

12 years agoMerge branch 'master' of github.com:tla/stemmatology
Tara L Andrews [Wed, 7 Mar 2012 12:31:58 +0000]
Merge branch 'master' of github.com:tla/stemmatology