implement relationship logical propagation
Tara L Andrews [Sun, 30 Sep 2012 03:01:40 +0000 (05:01 +0200)]
base/lib/Text/Tradition/Collation/RelationshipStore.pm
base/lib/Text/Tradition/Parser/Tabular.pm
base/t/data/john.xml
base/t/text_tradition_collation_relationshipstore.t

index 4801152..31c0716 100644 (file)
@@ -155,7 +155,7 @@ sub BUILD {
                { name => 'lexical', bindlevel => 2 },
                { name => 'uncertain', bindlevel => 50, is_transitive => 0, is_generalizable => 0 },
                { name => 'other', bindlevel => 50, is_transitive => 0, is_generalizable => 0 },
-               { name => 'transposition', bindlevel => 50, is_colocation => 0, is_transitive => 0 },
+               { name => 'transposition', bindlevel => 50, is_colocation => 0 },
                { name => 'repetition', bindlevel => 50, is_colocation => 0, is_transitive => 0 }
                );
        
@@ -442,7 +442,7 @@ try {
        ok( 0, "Failed to add normal transposition complement: " . $e->message );
 }
 
-# TODO Test 4: make a global relationship that involves re-ranking a node first, when 
+# Test 4: make a global relationship that involves re-ranking a node first, when 
 # the prior rank has a potential match too
 my $t4 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/globalrel_test.xml' );
 my $c4 = $t4->collation;
@@ -459,6 +459,80 @@ $c4->calculate_ranks();
 # Do our readings now share a rank?
 is( $c4->reading('r463.2')->rank, $c4->reading('r463.4')->rank, 
        "Expected readings now at same rank" );
+       
+# Test group 5: relationship transitivity.
+my $t5 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/john.xml' );
+my $c5 = $t5->collation;
+
+# Test 5.1: make a grammatical link to an orthographically-linked reading
+$c5->add_relationship( 'r13.5', 'r13.2', { type => 'orthographic' } );
+$c5->add_relationship( 'r13.1', 'r13.2', { type => 'grammatical', propagate => 1 } );
+my $impliedrel = $c5->get_relationship( 'r13.1', 'r13.5' );
+ok( $impliedrel, 'Relationship was made between indirectly linked readings' );
+if( $impliedrel ) {
+       is( $impliedrel->type, 'grammatical', 'Implicit inbound relationship has the correct type' );
+}
+
+# Test 5.2: make another orthographic link, see if the grammatical one propagates
+$c5->add_relationship( 'r13.3', 'r13.5', { type => 'orthographic', propagate => 1 } );
+foreach my $rdg ( qw/ r13.3 r13.5 / ) {
+       my $newgram = $c5->get_relationship( 'r13.1', $rdg );
+       ok( $newgram, 'Relationship was propagaged up between indirectly linked readings' );
+       if( $newgram ) {
+               is( $newgram->type, 'grammatical', 'Implicit outbound relationship has the correct type' );
+       }
+}
+my $neworth = $c5->get_relationship( 'r13.2', 'r13.3' );
+ok( $neworth, 'Relationship was made between indirectly linked siblings' );
+if( $neworth ) {
+       is( $neworth->type, 'orthographic', 'Implicit direct relationship has the correct type' );
+}
+
+# Test 5.3: make an intermediate (spelling) link to the remaining node
+$c5->add_relationship( 'r13.4', 'r13.2', { type => 'spelling', propagate => 1 } );
+# Should be linked grammatically to 12.1, spelling-wise to the rest
+my $newgram = $c5->get_relationship( 'r13.4', 'r13.1' );
+ok( $newgram, 'Relationship was made between indirectly linked readings' );
+if( $newgram ) {
+       is( $newgram->type, 'grammatical', 'Implicit intermediate-out relationship has the correct type' );
+}
+foreach my $rdg ( qw/ r13.3 r13.5 / ) {
+       my $newspel = $c5->get_relationship( 'r13.4', $rdg );
+       ok( $newspel, 'Relationship was made between indirectly linked readings' );
+       if( $newspel ) {
+               is( $newspel->type, 'spelling', 'Implicit intermediate-in relationship has the correct type' );
+       }
+}
+
+# Test 5.4: add a parallel but not sibling relationship
+$c5->add_relationship( 'r13.6', 'r13.2', { type => 'lexical', propagate => 1 } );
+ok( !$c5->get_relationship( 'r13.6', 'r13.1' ), 
+       "Lexical relationship did not affect grammatical" );
+foreach my $rdg ( qw/ r13.3 r13.4 r13.5 / ) {
+       my $newlex = $c5->get_relationship( 'r13.6', $rdg );
+       ok( $newlex, 'Parallel was made between indirectly linked readings' );
+       if( $newlex ) {
+               is( $newlex->type, 'lexical', 'Implicit parallel-down relationship has the correct type' );
+       }
+}
+
+# Test 5.5: try it with non-colocated relationships
+my $numrel = scalar $c5->relationships;
+$c5->add_relationship( 'r62.1', 'r64.1', { type => 'transposition', propagate => 1 } );
+is( scalar $c5->relationships, $numrel+1, 
+       "Adding non-colo relationship did not propagate" );
+# Add a pivot point
+$c5->add_relationship( 'r61.1', 'r61.5', { type => 'orthographic' } );
+# Add a third transposed node
+$c5->add_relationship( 'r62.1', 'r60.3', { type => 'transposition', propagate => 1 } );
+my $newtrans = $c5->get_relationship( 'r64.1', 'r60.3' );
+ok( $newtrans, 'Non-colo relationship was made between indirectly linked readings' );
+if( $newtrans ) {
+       is( $newtrans->type, 'transposition', 'Implicit non-colo relationship has the correct type' );
+}
+is( scalar $c5->relationships, $numrel+4, 
+       "Adding non-colo relationship only propagated on non-colos" );
+
 
 =end testing
 
@@ -475,6 +549,7 @@ sub add_relationship {
        my $relationship;
        my $reltype;
        my $thispaironly = delete $options->{thispaironly};
+       my $propagate = delete $options->{propagate};
        my $droppedcolls = [];
        if( ref( $options ) eq 'Text::Tradition::Collation::Relationship' ) {
                $relationship = $options;
@@ -550,12 +625,23 @@ sub add_relationship {
                }
        }
        $self->_set_relationship( $relationship, $source, $target ) unless $skip;
-       push( @pairs_set, [ $source, $target ] );
+       push( @pairs_set, [ $source, $target, $relationship->type ] );
     
        # Find all the pairs for which we need to set the relationship.
     if( $relationship->colocated && $relationship->nonlocal && !$thispaironly ) {
-               push( @pairs_set, $self->add_global_relationship( $relationship ) );
+       my @global_set = $self->add_global_relationship( $relationship );
+       map { push( @$_, $relationship->type ) } @global_set;
+               push( @pairs_set, @global_set );
     }
+    if( $propagate ) {
+               my @prop;
+       foreach my $ps ( @pairs_set ) {
+               my @extra = $self->propagate_relationship( $ps->[0], $ps->[1] );
+               push( @prop, @extra );
+       }
+       push( @pairs_set, @prop ) if @prop;
+    }
+       
     # Finally, restore whatever collations we can, and return.
     $self->_restore_weak( @$droppedcolls );
     return @pairs_set;
@@ -774,9 +860,9 @@ sub _restore_weak {
 
 =head2 related_readings( $reading, $filter )
 
-Returns a list of readings that are connected via relationship links to $reading.
-If $filter is set to a subroutine ref, returns only those related readings where
-$filter( $relationship ) returns a true value.
+Returns a list of readings that are connected via direct relationship links
+to $reading. If $filter is set to a subroutine ref, returns only those
+related readings where $filter( $relationship ) returns a true value.
 
 =cut
 
@@ -796,25 +882,10 @@ sub related_readings {
                        my $type = $filter;
                        $filter = sub { $_[0]->type eq $type };
                }
-               my %found = ( $reading => 1 );
-               my $check = [ $reading ];
-               my $iter = 0;
-               while( @$check ) {
-                       my $more = [];
-                       foreach my $r ( @$check ) {
-                               foreach my $nr ( $self->graph->neighbors( $r ) ) {
-                                       if( &$filter( $self->get_relationship( $r, $nr ) ) ) {
-                                               push( @$more, $nr ) unless exists $found{$nr};
-                                               $found{$nr} = 1;
-                                       }
-                               }
-                       }
-                       $check = $more;
-               }
-               delete $found{$reading};
-               @answer = keys %found;
+               @answer = grep { &$filter( $self->get_relationship( $reading, $_ ) ) }
+                       $self->graph->neighbors( $reading );
        } else {
-               @answer = $self->graph->all_reachable( $reading );
+               @answer = $self->graph->neighbors( $reading );
        }
        if( $return_object ) {
                my $c = $self->collation;
@@ -824,6 +895,124 @@ sub related_readings {
        }
 }
 
+=head2 propagate_relationship( $rel )
+
+Apply the transitivity and binding level rules to propagate the consequences of
+the specified relationship link, ensuring all consequent relationships exist.
+For now, we only propagate colocation links if we are passed a colocation, and
+we only propagate displacement links if we are given a displacement.
+
+Returns an array of tuples ( rdg1, rdg2, type ) for each new reading set.
+
+=cut
+
+sub propagate_relationship {
+       my( $self, @rel ) = @_;
+       ## Check that the vector is an arrayref
+       my $rel = @rel > 1 ? \@rel : $rel[0];
+       ## Get the relationship info
+       my $relobj = $self->get_relationship( $rel );
+       my $reltype = $self->type( $relobj->type );
+       return () unless $reltype->is_transitive;
+       my @newly_set;
+       
+       my $colo = $reltype->is_colocation;
+       my $bindlevel = $reltype->bindlevel;
+       
+       ## Find all readings that are linked via this relationship type
+       my %thislevel = ( $rel->[0] => 1, $rel->[1] => 1 );
+       my $check = $rel;
+       my $iter = 0;
+       while( @$check ) {
+               my $more = [];
+               foreach my $r ( @$check ) {
+                       push( @$more, grep { !exists $thislevel{$_}
+                               && $self->get_relationship( $r, $_ )
+                               && $self->get_relationship( $r, $_ )->type eq $relobj->type }
+                                       $self->graph->neighbors( $r ) );
+               }
+               map { $thislevel{$_} = 1 } @$more;
+               $check = $more;
+       }
+       
+       ## Make sure every reading of our relationship type is linked to every other
+       my @samelevel = keys %thislevel;
+       while( @samelevel ) {
+               my $r = shift @samelevel;
+               foreach my $nr ( @samelevel ) {
+                       my $existing = $self->get_relationship( $r, $nr );
+                       if( $existing ) {
+                               # Check that it's a matching type
+                               throw( "Conflicting existing relationship at $r, $nr trying to propagate "
+                                       . $relobj->type . " relationship at @$rel" )
+                                       unless $existing->type eq $relobj->type;
+                       } else {
+                               # Try to add a new relationship here
+                               try {
+                                       my @new = $self->add_relationship( $r, $nr, { type => $relobj->type, 
+                                               annotation => "Propagated from relationship at @$rel" } );
+                                       push( @newly_set, @new );
+                               } catch ( Text::Tradition::Error $e ) {
+                                       throw( "Could not propagate " . $relobj->type . 
+                                               " relationship (original @$rel) at $r -- $nr: " .
+                                               $e->message );
+                               }
+                       }
+               }
+
+               ## Now for each sibling our set, look for its direct connections to 
+               ## transitive readings of a different bindlevel, and make sure that 
+               ## all siblings are related to those readings.
+               my @other;
+               foreach my $n ( $self->graph->neighbors( $r ) ) {
+                       my $crel = $self->get_relationship( $r, $n );
+                       next unless $crel;
+                       my $crt = $self->type( $crel->type );
+                       if( $crt->is_transitive && $crt->is_colocation == $colo ) {
+                               next if $crt->bindlevel == $reltype->bindlevel;
+                               my $nrel = $crt->bindlevel < $reltype->bindlevel 
+                                       ? $reltype->name : $crt->name;
+                               push( @other, [ $n, $nrel ] );
+                       }
+               }
+               # The @other array now contains tuples of ( reading, type ) where the
+               # reading is the non-sibling and the type is the type of relationship 
+               # that the siblings should have to the non-sibling.     
+               foreach ( @other ) {
+                       my( $nr, $nrtype ) = @$_;
+                       foreach my $sib ( keys %thislevel ) {
+                               next if $sib eq $r;
+                               my $existing = $self->get_relationship( $sib, $nr );
+                               if( $existing ) {
+                                       # Check that it's compatible. The existing relationship type
+                                       # should match the looser of the two relationships in play,
+                                       # whether the original relationship being worked on or the
+                                       # relationship between $r and $or.
+                                       if( $nrtype ne $existing->type ) {
+                                               throw( "Conflicting existing relationship at $nr ( -> "
+                                                       . $self->get_relationship( $nr, $r )->type . " to $r) "
+                                                       . " -- $sib trying to propagate " . $relobj->type 
+                                                       . " relationship at @$rel" );
+                                       }
+                               } else {
+                                       # Try to add a new relationship here
+                                       try {
+                                               my @new = $self->add_relationship( $sib, $nr, { type => $nrtype, 
+                                                       annotation => "Propagated from relationship at @$rel" } );
+                                               push( @newly_set, @new );
+                                       } catch ( Text::Tradition::Error $e ) {
+                                               throw( "Could not propagate $nrtype relationship (original " . 
+                                                       $relobj->type . " at @$rel) at $sib -- $nr: " .
+                                                       $e->message );
+                                       }
+                               }
+                       }
+               }
+       }
+       
+       return @newly_set;
+}
+
 =head2 merge_readings( $kept, $deleted );
 
 Makes a best-effort merge of the relationship links between the given readings, and
index 2e56320..6d70155 100644 (file)
@@ -438,7 +438,6 @@ sub _add_collations {
        # reading at $rank-1.
        my @collate_pairs;
        foreach my $r ( 1 .. $collation->end->rank - 1 ) {
-               $DB::single = 1 if $r == 82 || $r == 104 || $r == 167;
                my $anchor;
                my @need_weak;
                my @here = grep { !$_->is_meta } $collation->readings_at_rank( $r );
index 75452a6..2f66aa8 100644 (file)
 <?xml version="1.0" encoding="UTF-8"?>
 <graphml xmlns="http://graphml.graphdrawing.org/xmlns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
-  <key attr.name="version" attr.type="string" for="graph" id="dg0"/>
-  <key attr.name="wit_list_separator" attr.type="string" for="graph" id="dg1"/>
-  <key attr.name="baselabel" attr.type="string" for="graph" id="dg2"/>
-  <key attr.name="linear" attr.type="string" for="graph" id="dg3"/>
-  <key attr.name="ac_label" attr.type="string" for="graph" id="dg4"/>
-  <key attr.name="text" attr.type="string" for="node" id="dn0"/>
-  <key attr.name="is_end" attr.type="boolean" for="node" id="dn1"/>
-  <key attr.name="is_start" attr.type="boolean" for="node" id="dn2"/>
-  <key attr.name="id" attr.type="string" for="node" id="dn3"/>
-  <key attr.name="rank" attr.type="string" for="node" id="dn4"/>
-  <key attr.name="is_lacuna" attr.type="boolean" for="node" id="dn5"/>
-  <key attr.name="witness" attr.type="string" for="edge" id="de0"/>
-  <key attr.name="non_correctable" attr.type="boolean" for="edge" id="de1"/>
-  <key attr.name="relationship" attr.type="string" for="edge" id="de2"/>
-  <key attr.name="non_independent" attr.type="boolean" for="edge" id="de3"/>
-  <key attr.name="extra" attr.type="boolean" for="edge" id="de4"/>
-  <key attr.name="class" attr.type="string" for="edge" id="de5"/>
-  <key attr.name="colocated" attr.type="boolean" for="edge" id="de6"/>
-  <graph edgedefault="directed" id="inline" parse.edgeids="canonical" parse.edges="391" parse.nodeids="canonical" parse.nodes="253" parse.order="nodesfirst">
-    <data key="dg0">3.0</data>
-    <data key="dg1">, </data>
-    <data key="dg2">base text</data>
-    <data key="dg3">1</data>
-    <data key="dg4"> (a.c.)</data>
+  <key attr.name="language" attr.type="string" for="graph" id="dg0"/>
+  <key attr.name="name" attr.type="string" for="graph" id="dg1"/>
+  <key attr.name="public" attr.type="boolean" for="graph" id="dg2"/>
+  <key attr.name="stemmata" attr.type="string" for="graph" id="dg3"/>
+  <key attr.name="user" attr.type="string" for="graph" id="dg4"/>
+  <key attr.name="version" attr.type="string" for="graph" id="dg5"/>
+  <key attr.name="grammar_invalid" attr.type="boolean" for="node" id="dn0"/>
+  <key attr.name="id" attr.type="string" for="node" id="dn1"/>
+  <key attr.name="is_common" attr.type="boolean" for="node" id="dn2"/>
+  <key attr.name="is_end" attr.type="boolean" for="node" id="dn3"/>
+  <key attr.name="is_lacuna" attr.type="boolean" for="node" id="dn4"/>
+  <key attr.name="is_nonsense" attr.type="boolean" for="node" id="dn5"/>
+  <key attr.name="is_ph" attr.type="boolean" for="node" id="dn6"/>
+  <key attr.name="is_start" attr.type="boolean" for="node" id="dn7"/>
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 </graphml>
index 65a2de8..c78d343 100644 (file)
@@ -172,7 +172,7 @@ try {
        ok( 0, "Failed to add normal transposition complement: " . $e->message );
 }
 
-# TODO Test 4: make a global relationship that involves re-ranking a node first, when 
+# Test 4: make a global relationship that involves re-ranking a node first, when 
 # the prior rank has a potential match too
 my $t4 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/globalrel_test.xml' );
 my $c4 = $t4->collation;
@@ -189,6 +189,79 @@ $c4->calculate_ranks();
 # Do our readings now share a rank?
 is( $c4->reading('r463.2')->rank, $c4->reading('r463.4')->rank, 
        "Expected readings now at same rank" );
+       
+# Test group 5: relationship transitivity.
+my $t5 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/john.xml' );
+my $c5 = $t5->collation;
+
+# Test 5.1: make a grammatical link to an orthographically-linked reading
+$c5->add_relationship( 'r13.5', 'r13.2', { type => 'orthographic' } );
+$c5->add_relationship( 'r13.1', 'r13.2', { type => 'grammatical', propagate => 1 } );
+my $impliedrel = $c5->get_relationship( 'r13.1', 'r13.5' );
+ok( $impliedrel, 'Relationship was made between indirectly linked readings' );
+if( $impliedrel ) {
+       is( $impliedrel->type, 'grammatical', 'Implicit inbound relationship has the correct type' );
+}
+
+# Test 5.2: make another orthographic link, see if the grammatical one propagates
+$c5->add_relationship( 'r13.3', 'r13.5', { type => 'orthographic', propagate => 1 } );
+foreach my $rdg ( qw/ r13.3 r13.5 / ) {
+       my $newgram = $c5->get_relationship( 'r13.1', $rdg );
+       ok( $newgram, 'Relationship was propagaged up between indirectly linked readings' );
+       if( $newgram ) {
+               is( $newgram->type, 'grammatical', 'Implicit outbound relationship has the correct type' );
+       }
+}
+my $neworth = $c5->get_relationship( 'r13.2', 'r13.3' );
+ok( $neworth, 'Relationship was made between indirectly linked siblings' );
+if( $neworth ) {
+       is( $neworth->type, 'orthographic', 'Implicit direct relationship has the correct type' );
+}
+
+# Test 5.3: make an intermediate (spelling) link to the remaining node
+$c5->add_relationship( 'r13.4', 'r13.2', { type => 'spelling', propagate => 1 } );
+# Should be linked grammatically to 12.1, spelling-wise to the rest
+my $newgram = $c5->get_relationship( 'r13.4', 'r13.1' );
+ok( $newgram, 'Relationship was made between indirectly linked readings' );
+if( $newgram ) {
+       is( $newgram->type, 'grammatical', 'Implicit intermediate-out relationship has the correct type' );
+}
+foreach my $rdg ( qw/ r13.3 r13.5 / ) {
+       my $newspel = $c5->get_relationship( 'r13.4', $rdg );
+       ok( $newspel, 'Relationship was made between indirectly linked readings' );
+       if( $newspel ) {
+               is( $newspel->type, 'spelling', 'Implicit intermediate-in relationship has the correct type' );
+       }
+}
+
+# Test 5.4: add a parallel but not sibling relationship
+$c5->add_relationship( 'r13.6', 'r13.2', { type => 'lexical', propagate => 1 } );
+ok( !$c5->get_relationship( 'r13.6', 'r13.1' ), 
+       "Lexical relationship did not affect grammatical" );
+foreach my $rdg ( qw/ r13.3 r13.4 r13.5 / ) {
+       my $newlex = $c5->get_relationship( 'r13.6', $rdg );
+       ok( $newlex, 'Parallel was made between indirectly linked readings' );
+       if( $newlex ) {
+               is( $newlex->type, 'lexical', 'Implicit parallel-down relationship has the correct type' );
+       }
+}
+
+# Test 5.5: try it with non-colocated relationships
+my $numrel = scalar $c5->relationships;
+$c5->add_relationship( 'r62.1', 'r64.1', { type => 'transposition', propagate => 1 } );
+is( scalar $c5->relationships, $numrel+1, 
+       "Adding non-colo relationship did not propagate" );
+# Add a pivot point
+$c5->add_relationship( 'r61.1', 'r61.5', { type => 'orthographic' } );
+# Add a third transposed node
+$c5->add_relationship( 'r62.1', 'r60.3', { type => 'transposition', propagate => 1 } );
+my $newtrans = $c5->get_relationship( 'r64.1', 'r60.3' );
+ok( $newtrans, 'Non-colo relationship was made between indirectly linked readings' );
+if( $newtrans ) {
+       is( $newtrans->type, 'transposition', 'Implicit non-colo relationship has the correct type' );
+}
+is( scalar $c5->relationships, $numrel+4, 
+       "Adding non-colo relationship only propagated on non-colos" );
 }