X-Git-Url: http://git.shadowcat.co.uk/gitweb/gitweb.cgi?a=blobdiff_plain;f=t%2F08postgres-to-mysql.t;h=ff365e1f2151df14aa5dd7100635e31211f8c1a4;hb=ae95e48e16c26a573063628ea56c2d54040e88f9;hp=596d63394b232e735c9282afd67210c500ae2b4f;hpb=bd9f7203e4b205a95bbb8a532810867c631a6331;p=dbsrgits%2FSQL-Translator.git

diff --git a/t/08postgres-to-mysql.t b/t/08postgres-to-mysql.t
index 596d633..ff365e1 100644
--- a/t/08postgres-to-mysql.t
+++ b/t/08postgres-to-mysql.t
@@ -1,11 +1,22 @@
 #!/usr/local/bin/perl
 # vim: set ft=perl:
 
-BEGIN { print "1..1\n" }
+use strict;
+use Test::More;
+use SQL::Translator;
+use Data::Dumper;
+use Test::SQL::Translator qw(maybe_plan);
+
+BEGIN {
+    maybe_plan(1,
+        'SQL::Translator::Parser::PostgreSQL',
+        'SQL::Translator::Producer::MySQL',
+    );
+}
 
 my $create = q|
 
--- The cvterm module design is based on the ontology 
+-- The cvterm module design is based on the ontology
 
 -- ================================================
 -- TABLE: cv
@@ -38,10 +49,25 @@ create table cvterm (
 );
 create index cvterm_idx1 on cvterm (cv_id);
 -- the primary dbxref for this term.  Other dbxrefs may be cvterm_dbxref
--- The unique key on termname, termtype_id ensures that all terms are 
+-- The unique key on termname, termtype_id ensures that all terms are
 -- unique within a given cv
 
 
+COMMENT ON TABLE cvterm IS
+ 'A term, class or concept within an ontology
+  or controlled vocabulary';
+COMMENT ON COLUMN cvterm.cv_id IS
+ 'The cv/ontology/namespace to which this cvterm belongs';
+COMMENT ON COLUMN cvterm.name IS
+ 'A concise human-readable name describing the meaning of the cvterm';
+COMMENT ON COLUMN cvterm.termdefinition IS
+ 'A human-readable text definition';
+COMMENT ON COLUMN cvterm.dbxref_id IS
+ 'A human-readable text definition';
+COMMENT ON INDEX cvterm_c1 IS
+ 'the OBO identifier is globally unique';
+
+
 -- ================================================
 -- TABLE: cvrelationship
 -- ================================================
@@ -99,7 +125,10 @@ create table cvtermsynonym (
 
        unique(cvterm_id, termsynonym)
 );
-create index cvterm_synonym_idx1 on cvterm_synonym (cvterm_id);
+
+-- The table "cvterm_synonym" doesn't exist, so
+-- creating an index on it screws things up!
+-- create index cvterm_synonym_idx1 on cvterm_synonym (cvterm_id);
 
 -- ================================================
 -- TABLE: cvterm_dbxref
@@ -118,136 +147,28 @@ create table cvterm_dbxref (
 create index cvterm_dbxref_idx1 on cvterm_dbxref (cvterm_id);
 create index cvterm_dbxref_idx2 on cvterm_dbxref (dbxref_id);
 
-|;
-
-use SQL::Translator;
-use Data::Dumper;
-
-$SQL::Translator::DEBUG = 0;
-
-my $tr = SQL::Translator->new(parser   => "PostgreSQL",
-                              producer => "MySQL"
-                              #producer => "SQL::Translator::Producer::MySQL::translate"
-                              #producer => sub { Dumper($_[1]) }
-                             );
-
-print "not " unless ($tr->translate(\$create));
-print "ok 1 # pointless test -- plz fix me!\n";
-
-__END__
-__DATA__
-
--- The cvterm module design is based on the ontology 
-
--- ================================================
--- TABLE: cv
--- ================================================
-
-create table cv (
-       cv_id serial not null,
-       primary key (cv_id),
-       cvname varchar not null,
-       cvdefinition text,
-
-       unique(cvname)
-);
-
--- ================================================
--- TABLE: cvterm
--- ================================================
-
-create table cvterm (
-       cvterm_id serial not null,
-       primary key (cvterm_id),
-       cv_id int not null,
-       foreign key (cv_id) references cv (cv_id),
-       name varchar(255) not null,
-       termdefinition text,
--- the primary dbxref for this term.  Other dbxrefs may be cvterm_dbxref
-       dbxref_id int,
-       foreign key (dbxref_id) references dbxref (dbxref_id),
-
-       unique(termname, cv_id)
--- The unique key on termname, termtype_id ensures that all terms are 
--- unique within a given cv
-);
-create index cvterm_idx1 on cvterm (cv_id);
-
-
--- ================================================
--- TABLE: cvrelationship
--- ================================================
-
-create table cvrelationship (
-       cvrelationship_id serial not null,
-       primary key (cvrelationship_id),
-       reltype_id int not null,
-       foreign key (reltype_id) references cvterm (cvterm_id),
-       subjterm_id int not null,
-       foreign key (subjterm_id) references cvterm (cvterm_id),
-       objterm_id int not null,
-       foreign key (objterm_id) references cvterm (cvterm_id),
-
-       unique(reltype_id, subjterm_id, objterm_id)
-);
-create index cvrelationship_idx1 on cvrelationship (reltype_id);
-create index cvrelationship_idx2 on cvrelationship (subjterm_id);
-create index cvrelationship_idx3 on cvrelationship (objterm_id);
-
-
--- ================================================
--- TABLE: cvpath
--- ================================================
-
-create table cvpath (
-       cvpath_id serial not null,
-       primary key (cvpath_id),
-       reltype_id int,
-       foreign key (reltype_id) references cvterm (cvterm_id),
-       subjterm_id int not null,
-       foreign key (subjterm_id) references cvterm (cvterm_id),
-       objterm_id int not null,
-       foreign key (objterm_id) references cvterm (cvterm_id),
-       cv_id int not null,
-       foreign key (cv_id) references cv (cv_id),
-       pathdistance int,
-
-       unique (subjterm_id, objterm_id)
-);
-create index cvpath_idx1 on cvpath (reltype_id);
-create index cvpath_idx2 on cvpath (subjterm_id);
-create index cvpath_idx3 on cvpath (objterm_id);
-create index cvpath_idx4 on cvpath (cv_id);
-
-
 -- ================================================
--- TABLE: cvtermsynonym
+-- TABLE: cvterm_geom
 -- ================================================
 
-create table cvtermsynonym (
+create table cvterm_geom (
+       cvterm_geom_id serial not null,
+       primary key (cvterm_geom_id),
        cvterm_id int not null,
        foreign key (cvterm_id) references cvterm (cvterm_id),
-       termsynonym varchar(255) not null,
-
-       unique(cvterm_id, termsynonym)
+       cvterm_geom geometry,
+       constraint "enforce_dims_cvterm_geom" CHECK ((st_ndims(cvterm_geom) = 2)),
+       constraint "enforce_srid_cvterm_geom" CHECK ((st_srid(cvterm_geom) = -1)),
+       constraint "enforce_geotype_cvterm_geom" CHECK ((geometrytype(cvterm_geom) = 'POINT'::text OR cvterm_geom IS NULL)),
+       unique(cvterm_id)
 );
-create index cvterm_synonym_idx1 on cvterm_synonym (cvterm_id);
 
--- ================================================
--- TABLE: cvterm_dbxref
--- ================================================
 
-create table cvterm_dbxref (
-       cvterm_dbxref_id serial not null,
-       primary key (cvterm_dbxref_id),
-       cvterm_id int not null,
-       foreign key (cvterm_id) references cvterm (cvterm_id),
-       dbxref_id int not null,
-       foreign key (dbxref_id) references dbxref (dbxref_id),
+|;
 
-       unique(cvterm_id, dbxref_id)
+my $tr = SQL::Translator->new(
+    parser   => "PostgreSQL",
+    producer => "MySQL"
 );
-create index cvterm_dbxref_idx1 on cvterm_dbxref (cvterm_id);
-create index cvterm_dbxref_idx2 on cvterm_dbxref (dbxref_id);
-
 
+ok( $tr->translate(\$create), 'Translate PG2My' ) or diag($tr->error);