--- /dev/null
+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+ <html xmlns="http://www.w3.org/1999/xhtml">
+<!--
+This file was generated by Devel::NYTProf version 4.06
+-->
+<head>
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+ <meta http-equiv="Content-Language" content="en-us" />
+ <title>Profile of lib/Text/Tradition.pm</title>
+<link rel="stylesheet" type="text/css" href="style.css" />
+ <script type="text/javascript" src="js/jquery-min.js"></script>
+
+ <script type="text/javascript" src="js/jquery-tablesorter-min.js"></script>
+ <link rel="stylesheet" type="text/css" href="js/style-tablesorter.css" />
+ <script type="text/javascript">
+ // when a column is first clicked on to sort it, use descending order
+ // XXX doesn't seem to work (and not just because the tablesorter formatSortingOrder() is broken)
+ $.tablesorter.defaults.sortInitialOrder = "desc";
+ // add parser through the tablesorter addParser method
+ $.tablesorter.addParser({
+ id: 'fmt_time', // name of this parser
+ is: function(s) {
+ return false; // return false so this parser is not auto detected
+ },
+ format: function(orig) { // format data for normalization
+ // console.log(orig);
+ val = orig.replace(/ns/,'');
+ if (val != orig) { return val / (1000*1000*1000); }
+ val = orig.replace(/µs/,''); /* XXX use µ ? */
+ if (val != orig) { return val / (1000*1000); }
+ var val = orig.replace(/ms/,'');
+ if (val != orig) { return val / (1000); }
+ var val = orig.replace(/s/,'');
+ if (val != orig) { return val; }
+ if (orig == '0') { return orig; }
+ console.log('no match for fmt_time of '.concat(orig));
+ return orig;
+ },
+ type: 'numeric' // set type, either numeric or text
+ });
+ </script>
+</head>
+
+<body >
+<div class="header" style="position: relative; overflow-x: hidden; overflow-y: hidden; z-index: 0; ">
+<div class="header_back">
+ <a href="index.html">← Index</a>
+ </div>
+<div class="headerForeground" style="float: left">
+ <span class="siteTitle">NYTProf Performance Profile</span>
+ <span class="siteSubtitle">  <span>« <span class="mode_btn"><a href="lib-Text-Tradition-pm-673-block.html">block view</a></span> • <span class="mode_btn"><a href="lib-Text-Tradition-pm-673-line.html">line view</a></span> • <span class="mode_btn mode_btn_selected">sub view</span> »</span><br />
+ For script/nytprof.pl
+ </span>
+</div>
+<div class="headerForeground" style="float: right; text-align: right">
+ <span class="siteTitle"> </span>
+ <span class="siteSubtitle">Run on Thu May 31 16:29:39 2012<br />Reported on Thu May 31 16:35:01 2012</span>
+</div>
+<div style="position: absolute; left: 0px; top: 0%; width: 100%; height: 101%; z-index: -1; background-color: rgb(17, 136, 255); "></div>
+<div style="position: absolute; left: 0px; top: 2%; width: 100%; height: 99%; z-index: -1; background-color: rgb(16, 134, 253); "></div>
+<div style="position: absolute; left: 0px; top: 4%; width: 100%; height: 97%; z-index: -1; background-color: rgb(16, 133, 252); "></div>
+<div style="position: absolute; left: 0px; top: 6%; width: 100%; height: 95%; z-index: -1; background-color: rgb(15, 131, 250); "></div>
+<div style="position: absolute; left: 0px; top: 8%; width: 100%; height: 93%; z-index: -1; background-color: rgb(15, 130, 249); "></div>
+<div style="position: absolute; left: 0px; top: 10%; width: 100%; height: 91%; z-index: -1; background-color: rgb(15, 129, 248); "></div>
+<div style="position: absolute; left: 0px; top: 12%; width: 100%; height: 89%; z-index: -1; background-color: rgb(14, 127, 246); "></div>
+<div style="position: absolute; left: 0px; top: 14%; width: 100%; height: 87%; z-index: -1; background-color: rgb(14, 126, 245); "></div>
+<div style="position: absolute; left: 0px; top: 16%; width: 100%; height: 85%; z-index: -1; background-color: rgb(14, 125, 244); "></div>
+<div style="position: absolute; left: 0px; top: 18%; width: 100%; height: 83%; z-index: -1; background-color: rgb(13, 123, 242); "></div>
+<div style="position: absolute; left: 0px; top: 20%; width: 100%; height: 81%; z-index: -1; background-color: rgb(13, 122, 241); "></div>
+<div style="position: absolute; left: 0px; top: 22%; width: 100%; height: 79%; z-index: -1; background-color: rgb(13, 121, 240); "></div>
+<div style="position: absolute; left: 0px; top: 24%; width: 100%; height: 77%; z-index: -1; background-color: rgb(12, 119, 238); "></div>
+<div style="position: absolute; left: 0px; top: 26%; width: 100%; height: 75%; z-index: -1; background-color: rgb(12, 118, 237); "></div>
+<div style="position: absolute; left: 0px; top: 28%; width: 100%; height: 73%; z-index: -1; background-color: rgb(12, 116, 235); "></div>
+<div style="position: absolute; left: 0px; top: 30%; width: 100%; height: 71%; z-index: -1; background-color: rgb(11, 115, 234); "></div>
+<div style="position: absolute; left: 0px; top: 32%; width: 100%; height: 69%; z-index: -1; background-color: rgb(11, 114, 233); "></div>
+<div style="position: absolute; left: 0px; top: 34%; width: 100%; height: 67%; z-index: -1; background-color: rgb(11, 112, 231); "></div>
+<div style="position: absolute; left: 0px; top: 36%; width: 100%; height: 65%; z-index: -1; background-color: rgb(10, 111, 230); "></div>
+<div style="position: absolute; left: 0px; top: 38%; width: 100%; height: 63%; z-index: -1; background-color: rgb(10, 110, 229); "></div>
+<div style="position: absolute; left: 0px; top: 40%; width: 100%; height: 61%; z-index: -1; background-color: rgb(10, 108, 227); "></div>
+<div style="position: absolute; left: 0px; top: 42%; width: 100%; height: 59%; z-index: -1; background-color: rgb(9, 107, 226); "></div>
+<div style="position: absolute; left: 0px; top: 44%; width: 100%; height: 57%; z-index: -1; background-color: rgb(9, 106, 225); "></div>
+<div style="position: absolute; left: 0px; top: 46%; width: 100%; height: 55%; z-index: -1; background-color: rgb(9, 104, 223); "></div>
+<div style="position: absolute; left: 0px; top: 48%; width: 100%; height: 53%; z-index: -1; background-color: rgb(8, 103, 222); "></div>
+<div style="position: absolute; left: 0px; top: 50%; width: 100%; height: 51%; z-index: -1; background-color: rgb(8, 102, 221); "></div>
+<div style="position: absolute; left: 0px; top: 52%; width: 100%; height: 49%; z-index: -1; background-color: rgb(8, 100, 219); "></div>
+<div style="position: absolute; left: 0px; top: 54%; width: 100%; height: 47%; z-index: -1; background-color: rgb(7, 99, 218); "></div>
+<div style="position: absolute; left: 0px; top: 56%; width: 100%; height: 45%; z-index: -1; background-color: rgb(7, 97, 216); "></div>
+<div style="position: absolute; left: 0px; top: 58%; width: 100%; height: 43%; z-index: -1; background-color: rgb(7, 96, 215); "></div>
+<div style="position: absolute; left: 0px; top: 60%; width: 100%; height: 41%; z-index: -1; background-color: rgb(6, 95, 214); "></div>
+<div style="position: absolute; left: 0px; top: 62%; width: 100%; height: 39%; z-index: -1; background-color: rgb(6, 93, 212); "></div>
+<div style="position: absolute; left: 0px; top: 64%; width: 100%; height: 37%; z-index: -1; background-color: rgb(6, 92, 211); "></div>
+<div style="position: absolute; left: 0px; top: 66%; width: 100%; height: 35%; z-index: -1; background-color: rgb(5, 91, 210); "></div>
+<div style="position: absolute; left: 0px; top: 68%; width: 100%; height: 33%; z-index: -1; background-color: rgb(5, 89, 208); "></div>
+<div style="position: absolute; left: 0px; top: 70%; width: 100%; height: 31%; z-index: -1; background-color: rgb(5, 88, 207); "></div>
+<div style="position: absolute; left: 0px; top: 72%; width: 100%; height: 29%; z-index: -1; background-color: rgb(4, 87, 206); "></div>
+<div style="position: absolute; left: 0px; top: 74%; width: 100%; height: 27%; z-index: -1; background-color: rgb(4, 85, 204); "></div>
+<div style="position: absolute; left: 0px; top: 76%; width: 100%; height: 25%; z-index: -1; background-color: rgb(4, 84, 203); "></div>
+<div style="position: absolute; left: 0px; top: 78%; width: 100%; height: 23%; z-index: -1; background-color: rgb(3, 82, 201); "></div>
+<div style="position: absolute; left: 0px; top: 80%; width: 100%; height: 21%; z-index: -1; background-color: rgb(3, 81, 200); "></div>
+<div style="position: absolute; left: 0px; top: 82%; width: 100%; height: 19%; z-index: -1; background-color: rgb(3, 80, 199); "></div>
+<div style="position: absolute; left: 0px; top: 84%; width: 100%; height: 17%; z-index: -1; background-color: rgb(2, 78, 197); "></div>
+<div style="position: absolute; left: 0px; top: 86%; width: 100%; height: 15%; z-index: -1; background-color: rgb(2, 77, 196); "></div>
+<div style="position: absolute; left: 0px; top: 88%; width: 100%; height: 13%; z-index: -1; background-color: rgb(2, 76, 195); "></div>
+<div style="position: absolute; left: 0px; top: 90%; width: 100%; height: 11%; z-index: -1; background-color: rgb(1, 74, 193); "></div>
+<div style="position: absolute; left: 0px; top: 92%; width: 100%; height: 9%; z-index: -1; background-color: rgb(1, 73, 192); "></div>
+<div style="position: absolute; left: 0px; top: 94%; width: 100%; height: 7%; z-index: -1; background-color: rgb(1, 72, 191); "></div>
+<div style="position: absolute; left: 0px; top: 96%; width: 100%; height: 5%; z-index: -1; background-color: rgb(0, 70, 189); "></div>
+<div style="position: absolute; left: 0px; top: 98%; width: 100%; height: 3%; z-index: -1; background-color: rgb(0, 69, 188); "></div>
+<div style="position: absolute; left: 0px; top: 100%; width: 100%; height: 1%; z-index: -1; background-color: rgb(0, 68, 187); "></div>
+</div>
+
+<div class="body_content"><br />
+<table class="file_summary"><tr><td class="h">Filename</td><td align="left"><a href="file:///Users/edenc/share/src/stemmatology/stemmaweb/lib/Text/Tradition.pm">/Users/edenc/share/src/stemmatology/stemmaweb/lib/Text/Tradition.pm</a></td></tr>
+<tr><td class="h">Statements</td><td align="left">Executed 148 statements in 2.08ms</td></tr></table>
+
+ <table id="subs_table" border="1" cellpadding="0" class="tablesorter">
+ <caption>Subroutines</caption>
+ <thead>
+ <tr>
+ <th>Calls</th>
+ <th><span title="Number of Places sub is called from">P</span></th>
+ <th><span title="Number of Files sub is called from">F</span></th>
+ <th>Exclusive<br />Time</th>
+ <th>Inclusive<br />Time</th>
+ <th>Subroutine</th>
+ </tr>
+ </thead>
+ <tbody>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c0"><span title="0.0%">8.30ms</span></td><td class="c0"><span title="2.2%">1.17s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@6</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#6">BEGIN@6</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c0"><span title="0.0%">4.46ms</span></td><td class="c0"><span title="0.8%">415ms</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@8</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#8">BEGIN@8</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c0"><span title="0.0%">2.90ms</span></td><td class="c1"><span title="0.0%">11.4ms</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@3</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#3">BEGIN@3</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c0"><span title="0.0%">1.81ms</span></td><td class="c0"><span title="0.1%">44.8ms</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@7</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#7">BEGIN@7</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c0"><span title="0.0%">496µs</span></td><td class="c3"><span title="0.0%">566µs</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@4</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#4">BEGIN@4</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">61µs</span></td><td class="c0"><span title="67.9%">35.8s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BUILD</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#252">BUILD</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">12µs</span></td><td class="c3"><span title="0.0%">4.81ms</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@5</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#5">BEGIN@5</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">10µs</span></td><td class="c3"><span title="0.0%">37µs</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@10</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#10">BEGIN@10</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">10µs</span></td><td class="c3"><span title="0.0%">106µs</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::BEGIN@370</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#370">BEGIN@370</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">3µs</span></td><td class="c3"><span title="0.0%">3µs</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::__ANON__[lib/Text/Tradition.pm:54]</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#54">__ANON__[lib/Text/Tradition.pm:54]</a></span></td></tr>
+<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">2µs</span></td><td class="c3"><span title="0.0%">2µs</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::__ANON__[lib/Text/Tradition.pm:29]</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#29">__ANON__[lib/Text/Tradition.pm:29]</a></span></td></tr>
+<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::__ANON__[lib/Text/Tradition.pm:69]</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#58">__ANON__[lib/Text/Tradition.pm:69]</a></span></td></tr>
+<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::__ANON__[lib/Text/Tradition.pm:81]</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#72">__ANON__[lib/Text/Tradition.pm:81]</a></span></td></tr>
+<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::__ANON__[lib/Text/Tradition.pm:88]</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#84">__ANON__[lib/Text/Tradition.pm:88]</a></span></td></tr>
+<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::add_json_witnesses</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#302">add_json_witnesses</a></span></td></tr>
+<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::add_stemma</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#339">add_stemma</a></span></td></tr>
+<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Text::Tradition::::lemmatize</span>Text::Tradition::<a href="lib-Text-Tradition-pm-673-sub.html#359">lemmatize</a></span></td></tr>
+</tbody></table>
+ Call graph for these subroutines as a
+ <a href="http://en.wikipedia.org/wiki/Graphviz">Graphviz</a>
+ <a href="Users-edenc-share-src-stemmatology-stemmaweb-lib-Text-Tradition-pm.dot">dot language file</a>.
+
+ <table border="1" cellpadding="0">
+ <thead>
+ <tr><th>Line</th>
+ <th><span title="Number of statements executed">State<br />ments</span></th>
+ <th><span title="Time spend executing statements on the line,
+ excluding time spent executing statements in any called subroutines">Time<br />on line</span></th>
+ <th><span title="Number of subroutines calls">Calls</span></th>
+ <th><span title="Time spent in subroutines called (inclusive)">Time<br />in subs</span></th>
+ <th class="left_indent_header">Code</th>
+ </tr>
+
+ </thead>
+ <tbody>
+ <tr><td class="h"><a name="1"></a>1</td><td></td><td></td><td></td><td></td><td class="s">package Text::Tradition;</td></tr>
+<tr><td class="h"><a name="2"></a>2</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="3"></a>3</td><td class="c1">2</td><td class="c0"><span title="Avg 66µs">132µs</span></td><td class="c3">2</td><td class="c0">11.6ms</td><td class="s"><div class="calls"><div class="calls_in"># spent 11.4ms (2.90+8.54) within Text::Tradition::BEGIN@3 which was called:
+# once (2.90ms+8.54ms) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#3">line 3</a></div></div>use JSON qw / from_json /;<div class="calls"><div class="calls_out"># spent 11.4ms making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#3">Text::Tradition::BEGIN@3</a>
+# spent 168µs making 1 call to <a href="JSON-pm-674-sub.html#77">JSON::import</a></div></div></td></tr>
+<tr><td class="h"><a name="4"></a>4</td><td class="c1">2</td><td class="c0"><span title="Avg 63µs">127µs</span></td><td class="c3">2</td><td class="c3">580µs</td><td class="s"><div class="calls"><div class="calls_in"># spent 566µs (496+70) within Text::Tradition::BEGIN@4 which was called:
+# once (496µs+70µs) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#4">line 4</a></div></div>use Module::Load;<div class="calls"><div class="calls_out"># spent 566µs making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#4">Text::Tradition::BEGIN@4</a>
+# spent 14µs making 1 call to <a href="Module-Load-pm-683-sub.html#8">Module::Load::import</a></div></div></td></tr>
+<tr><td class="h"><a name="5"></a>5</td><td class="c1">2</td><td class="c3"><span title="Avg 29µs">58µs</span></td><td class="c3">2</td><td class="c0">9.60ms</td><td class="s"><div class="calls"><div class="calls_in"># spent 4.81ms (12µs+4.80) within Text::Tradition::BEGIN@5 which was called:
+# once (12µs+4.80ms) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#5">line 5</a></div></div>use Moose;<div class="calls"><div class="calls_out"># spent 4.81ms making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#5">Text::Tradition::BEGIN@5</a>
+# spent 4.80ms making 1 call to <a href="Moose-Exporter-pm-82-sub.html#402">Moose::Exporter::__ANON__[Moose/Exporter.pm:492]</a></div></div></td></tr>
+<tr><td class="h"><a name="6"></a>6</td><td class="c1">2</td><td class="c0"><span title="Avg 89µs">178µs</span></td><td class="c3">2</td><td class="c0">1.17s</td><td class="s"><div class="calls"><div class="calls_in"># spent 1.17s (8.30ms+1.16) within Text::Tradition::BEGIN@6 which was called:
+# once (8.30ms+1.16s) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#6">line 6</a></div></div>use Text::Tradition::Collation;<div class="calls"><div class="calls_out"># spent 1.17s making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#6">Text::Tradition::BEGIN@6</a>
+# spent 3µs making 1 call to <a href="UNIVERSAL-pm-738-sub.html#16">UNIVERSAL::import</a></div></div></td></tr>
+<tr><td class="h"><a name="7"></a>7</td><td class="c1">2</td><td class="c0"><span title="Avg 80µs">161µs</span></td><td class="c3">2</td><td class="c0">44.8ms</td><td class="s"><div class="calls"><div class="calls_in"># spent 44.8ms (1.81+43.0) within Text::Tradition::BEGIN@7 which was called:
+# once (1.81ms+43.0ms) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#7">line 7</a></div></div>use Text::Tradition::Stemma;<div class="calls"><div class="calls_out"># spent 44.8ms making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#7">Text::Tradition::BEGIN@7</a>
+# spent 3µs making 1 call to <a href="UNIVERSAL-pm-738-sub.html#16">UNIVERSAL::import</a></div></div></td></tr>
+<tr><td class="h"><a name="8"></a>8</td><td class="c1">2</td><td class="c0"><span title="Avg 88µs">176µs</span></td><td class="c3">2</td><td class="c0">415ms</td><td class="s"><div class="calls"><div class="calls_in"># spent 415ms (4.46+410) within Text::Tradition::BEGIN@8 which was called:
+# once (4.46ms+410ms) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#8">line 8</a></div></div>use Text::Tradition::Witness;<div class="calls"><div class="calls_out"># spent 415ms making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#8">Text::Tradition::BEGIN@8</a>
+# spent 3µs making 1 call to <a href="UNIVERSAL-pm-738-sub.html#16">UNIVERSAL::import</a></div></div></td></tr>
+<tr><td class="h"><a name="9"></a>9</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="10"></a>10</td><td class="c1">2</td><td class="c0"><span title="Avg 408µs">817µs</span></td><td class="c3">2</td><td class="c3">64µs</td><td class="s"><div class="calls"><div class="calls_in"># spent 37µs (10+27) within Text::Tradition::BEGIN@10 which was called:
+# once (10µs+27µs) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#10">line 10</a></div></div>use vars qw( $VERSION );<div class="calls"><div class="calls_out"># spent 37µs making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#10">Text::Tradition::BEGIN@10</a>
+# spent 27µs making 1 call to <a href="vars-pm-6-sub.html#10">vars::import</a></div></div></td></tr>
+<tr><td class="h"><a name="11"></a>11</td><td class="c3">1</td><td class="c3"><span title="Avg 700ns">700ns</span></td><td></td><td></td><td class="s">$VERSION = "0.5";</td></tr>
+<tr><td class="h"><a name="12"></a>12</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="13"></a>13</td><td class="c3">1</td><td class="c3"><span title="Avg 2µs">2µs</span></td><td class="c3">1</td><td class="c3">3.37ms</td><td class="s">has 'collation' => (<div class="calls"><div class="calls_out"># spent 3.37ms making 1 call to <a href="Moose-pm-62-sub.html#70">Moose::has</a></div></div></td></tr>
+<tr><td class="h"><a name="14"></a>14</td><td></td><td></td><td></td><td></td><td class="s"> is => 'ro',</td></tr>
+<tr><td class="h"><a name="15"></a>15</td><td></td><td></td><td></td><td></td><td class="s"> isa => 'Text::Tradition::Collation',</td></tr>
+<tr><td class="h"><a name="16"></a>16</td><td></td><td></td><td></td><td></td><td class="s"> writer => '_save_collation',</td></tr>
+<tr><td class="h"><a name="17"></a>17</td><td></td><td></td><td></td><td></td><td class="s"> );</td></tr>
+<tr><td class="h"><a name="18"></a>18</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="19"></a>19</td><td></td><td></td><td></td><td></td><td class="s">has 'witness_hash' => (</td></tr>
+<tr><td class="h"><a name="20"></a>20</td><td></td><td></td><td></td><td></td><td class="s"> traits => ['Hash'],</td></tr>
+<tr><td class="h"><a name="21"></a>21</td><td></td><td></td><td></td><td></td><td class="s"> isa => 'HashRef[Text::Tradition::Witness]',</td></tr>
+<tr><td class="h"><a name="22"></a>22</td><td></td><td></td><td></td><td></td><td class="s"> handles => {</td></tr>
+<tr><td class="h"><a name="23"></a>23</td><td></td><td></td><td></td><td></td><td class="s"> witness => 'get',</td></tr>
+<tr><td class="h"><a name="24"></a>24</td><td></td><td></td><td></td><td></td><td class="s"> add_witness => 'set',</td></tr>
+<tr><td class="h"><a name="25"></a>25</td><td></td><td></td><td></td><td></td><td class="s"> del_witness => 'delete',</td></tr>
+<tr><td class="h"><a name="26"></a>26</td><td></td><td></td><td></td><td></td><td class="s"> has_witness => 'exists',</td></tr>
+<tr><td class="h"><a name="27"></a>27</td><td></td><td></td><td></td><td></td><td class="s"> witnesses => 'values',</td></tr>
+<tr><td class="h"><a name="28"></a>28</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
+<tr><td class="h"><a name="29"></a>29</td><td class="c3">1</td><td class="c3"><span title="Avg 3µs">3µs</span></td><td></td><td></td><td class="s"><div class="calls"><div class="calls_in"># spent 2µs within Text::Tradition::__ANON__[lib/Text/Tradition.pm:29] which was called:
+# once (2µs+0s) by Text::Tradition::new at <a href="(eval 83)[Eval-Closure-pm-125]-192-line.html#86">line 86 of (eval 83)[Eval/Closure.pm:125]</a></div></div> default => sub { {} },</td></tr>
+<tr><td class="h"><a name="30"></a>30</td><td class="c3">1</td><td class="c3"><span title="Avg 10µs">10µs</span></td><td class="c3">1</td><td class="c0">12.7ms</td><td class="s"> );<div class="calls"><div class="calls_out"> # spent 12.7ms making 1 call to <a href="Moose-pm-62-sub.html#70">Moose::has</a></div></div></td></tr>
+<tr><td class="h"><a name="31"></a>31</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="32"></a>32</td><td class="c3">1</td><td class="c3"><span title="Avg 3µs">3µs</span></td><td class="c3">1</td><td class="c3">2.32ms</td><td class="s">has 'name' => (<div class="calls"><div class="calls_out"># spent 2.32ms making 1 call to <a href="Moose-pm-62-sub.html#70">Moose::has</a></div></div></td></tr>
+<tr><td class="h"><a name="33"></a>33</td><td></td><td></td><td></td><td></td><td class="s"> is => 'rw',</td></tr>
+<tr><td class="h"><a name="34"></a>34</td><td></td><td></td><td></td><td></td><td class="s"> isa => 'Str',</td></tr>
+<tr><td class="h"><a name="35"></a>35</td><td></td><td></td><td></td><td></td><td class="s"> default => 'Tradition',</td></tr>
+<tr><td class="h"><a name="36"></a>36</td><td></td><td></td><td></td><td></td><td class="s"> );</td></tr>
+<tr><td class="h"><a name="37"></a>37</td><td></td><td></td><td></td><td></td><td class="s"> </td></tr>
+<tr><td class="h"><a name="38"></a>38</td><td class="c3">1</td><td class="c3"><span title="Avg 3µs">3µs</span></td><td class="c3">1</td><td class="c3">2.94ms</td><td class="s">has 'language' => (<div class="calls"><div class="calls_out"># spent 2.94ms making 1 call to <a href="Moose-pm-62-sub.html#70">Moose::has</a></div></div></td></tr>
+<tr><td class="h"><a name="39"></a>39</td><td></td><td></td><td></td><td></td><td class="s"> is => 'rw',</td></tr>
+<tr><td class="h"><a name="40"></a>40</td><td></td><td></td><td></td><td></td><td class="s"> isa => 'Str',</td></tr>
+<tr><td class="h"><a name="41"></a>41</td><td></td><td></td><td></td><td></td><td class="s"> predicate => 'has_language',</td></tr>
+<tr><td class="h"><a name="42"></a>42</td><td></td><td></td><td></td><td></td><td class="s"> );</td></tr>
+<tr><td class="h"><a name="43"></a>43</td><td></td><td></td><td></td><td></td><td class="s"> </td></tr>
+<tr><td class="h"><a name="44"></a>44</td><td></td><td></td><td></td><td></td><td class="s">has 'stemmata' => (</td></tr>
+<tr><td class="h"><a name="45"></a>45</td><td></td><td></td><td></td><td></td><td class="s"> traits => ['Array'],</td></tr>
+<tr><td class="h"><a name="46"></a>46</td><td></td><td></td><td></td><td></td><td class="s"> isa => 'ArrayRef[Text::Tradition::Stemma]',</td></tr>
+<tr><td class="h"><a name="47"></a>47</td><td></td><td></td><td></td><td></td><td class="s"> handles => {</td></tr>
+<tr><td class="h"><a name="48"></a>48</td><td></td><td></td><td></td><td></td><td class="s"> stemmata => 'elements',</td></tr>
+<tr><td class="h"><a name="49"></a>49</td><td></td><td></td><td></td><td></td><td class="s"> _add_stemma => 'push',</td></tr>
+<tr><td class="h"><a name="50"></a>50</td><td></td><td></td><td></td><td></td><td class="s"> stemma => 'get',</td></tr>
+<tr><td class="h"><a name="51"></a>51</td><td></td><td></td><td></td><td></td><td class="s"> stemma_count => 'count',</td></tr>
+<tr><td class="h"><a name="52"></a>52</td><td></td><td></td><td></td><td></td><td class="s"> clear_stemmata => 'clear',</td></tr>
+<tr><td class="h"><a name="53"></a>53</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
+<tr><td class="h"><a name="54"></a>54</td><td class="c3">1</td><td class="c3"><span title="Avg 4µs">4µs</span></td><td></td><td></td><td class="s"><div class="calls"><div class="calls_in"># spent 3µs within Text::Tradition::__ANON__[lib/Text/Tradition.pm:54] which was called:
+# once (3µs+0s) by Text::Tradition::new at <a href="(eval 83)[Eval-Closure-pm-125]-192-line.html#72">line 72 of (eval 83)[Eval/Closure.pm:125]</a></div></div> default => sub { [] },</td></tr>
+<tr><td class="h"><a name="55"></a>55</td><td class="c3">1</td><td class="c3"><span title="Avg 12µs">12µs</span></td><td class="c3">1</td><td class="c0">27.4ms</td><td class="s"> );<div class="calls"><div class="calls_out"> # spent 27.4ms making 1 call to <a href="Moose-pm-62-sub.html#70">Moose::has</a></div></div></td></tr>
+<tr><td class="h"><a name="56"></a>56</td><td></td><td></td><td></td><td></td><td class="s"> </td></tr>
+<tr><td class="h"><a name="57"></a>57</td><td></td><td></td><td></td><td></td><td class="s"># Create the witness before trying to add it</td></tr>
+<tr><td class="h"><a name="58"></a>58</td><td></td><td></td><td></td><td></td><td class="s">around 'add_witness' => sub {</td></tr>
+<tr><td class="h"><a name="59"></a>59</td><td class="c0">104</td><td class="c0"><span title="Avg 1µs">142µs</span></td><td></td><td></td><td class="s"> my $orig = shift;</td></tr>
+<tr><td class="h"><a name="60"></a>60</td><td></td><td></td><td></td><td></td><td class="s"> my $self = shift;</td></tr>
+<tr><td class="h"><a name="61"></a>61</td><td></td><td></td><td></td><td></td><td class="s"> # TODO allow add of a Witness object?</td></tr>
+<tr><td class="h"><a name="62"></a>62</td><td></td><td></td><td></td><td></td><td class="s"> my %args = @_ == 1 ? %{$_[0]} : @_;</td></tr>
+<tr><td class="h"><a name="63"></a>63</td><td></td><td></td><td></td><td></td><td class="s"> $args{'tradition'} = $self;</td></tr>
+<tr><td class="h"><a name="64"></a>64</td><td></td><td></td><td class="c0">13</td><td class="c3">21µs</td><td class="s"> $args{'language'} = $self->language <div class="calls"><div class="calls_out"> # spent 21µs making 13 calls to <a href="Class-MOP-Package-pm-122-sub.html#221">Text::Tradition::language</a>, avg 2µs/call</div></div></td></tr>
+<tr><td class="h"><a name="65"></a>65</td><td></td><td></td><td></td><td></td><td class="s"> if( $self->language && !exists $args{'language'} );</td></tr>
+<tr><td class="h"><a name="66"></a>66</td><td></td><td></td><td class="c0">13</td><td class="c3">1.73ms</td><td class="s"> my $new_wit = Text::Tradition::Witness->new( %args );<div class="calls"><div class="calls_out"> # spent 1.73ms making 13 calls to <a href="Class-MOP-Package-pm-122-sub.html#221">Text::Tradition::Witness::new</a>, avg 133µs/call</div></div></td></tr>
+<tr><td class="h"><a name="67"></a>67</td><td></td><td></td><td class="c0">26</td><td class="c3">235µs</td><td class="s"> $self->$orig( $new_wit->sigil => $new_wit );<div class="calls"><div class="calls_out"> # spent 202µs making 13 calls to <a href="Class-MOP-Package-pm-122-sub.html#221">Text::Tradition::add_witness</a>, avg 16µs/call
+ # spent 33µs making 13 calls to <a href="Class-MOP-Package-pm-122-sub.html#221">Text::Tradition::Witness::sigil</a>, avg 3µs/call</div></div></td></tr>
+<tr><td class="h"><a name="68"></a>68</td><td></td><td></td><td></td><td></td><td class="s"> return $new_wit;</td></tr>
+<tr><td class="h"><a name="69"></a>69</td><td class="c3">1</td><td class="c3"><span title="Avg 13µs">13µs</span></td><td class="c3">1</td><td class="c3">511µs</td><td class="s">};<div class="calls"><div class="calls_out"># spent 511µs making 1 call to <a href="Moose-pm-62-sub.html#90">Moose::around</a></div></div></td></tr>
+<tr><td class="h"><a name="70"></a>70</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="71"></a>71</td><td></td><td></td><td></td><td></td><td class="s"># Allow deletion of witness by object as well as by sigil</td></tr>
+<tr><td class="h"><a name="72"></a>72</td><td></td><td></td><td></td><td></td><td class="s">around 'del_witness' => sub {</td></tr>
+<tr><td class="h"><a name="73"></a>73</td><td></td><td></td><td></td><td></td><td class="s"> my $orig = shift;</td></tr>
+<tr><td class="h"><a name="74"></a>74</td><td></td><td></td><td></td><td></td><td class="s"> my $self = shift;</td></tr>
+<tr><td class="h"><a name="75"></a>75</td><td></td><td></td><td></td><td></td><td class="s"> my @key_args;</td></tr>
+<tr><td class="h"><a name="76"></a>76</td><td></td><td></td><td></td><td></td><td class="s"> foreach my $arg ( @_ ) {</td></tr>
+<tr><td class="h"><a name="77"></a>77</td><td></td><td></td><td></td><td></td><td class="s"> push( @key_args, </td></tr>
+<tr><td class="h"><a name="78"></a>78</td><td></td><td></td><td></td><td></td><td class="s"> ref( $arg ) eq 'Text::Tradition::Witness' ? $arg->sigil : $arg );</td></tr>
+<tr><td class="h"><a name="79"></a>79</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="80"></a>80</td><td></td><td></td><td></td><td></td><td class="s"> return $self->$orig( @key_args );</td></tr>
+<tr><td class="h"><a name="81"></a>81</td><td class="c3">1</td><td class="c3"><span title="Avg 9µs">9µs</span></td><td class="c3">1</td><td class="c3">421µs</td><td class="s">};<div class="calls"><div class="calls_out"># spent 421µs making 1 call to <a href="Moose-pm-62-sub.html#90">Moose::around</a></div></div></td></tr>
+<tr><td class="h"><a name="82"></a>82</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="83"></a>83</td><td></td><td></td><td></td><td></td><td class="s"># Don't allow an empty hash value</td></tr>
+<tr><td class="h"><a name="84"></a>84</td><td></td><td></td><td></td><td></td><td class="s">around 'witness' => sub {</td></tr>
+<tr><td class="h"><a name="85"></a>85</td><td></td><td></td><td></td><td></td><td class="s"> my( $orig, $self, $arg ) = @_;</td></tr>
+<tr><td class="h"><a name="86"></a>86</td><td></td><td></td><td></td><td></td><td class="s"> return unless $self->has_witness( $arg );</td></tr>
+<tr><td class="h"><a name="87"></a>87</td><td></td><td></td><td></td><td></td><td class="s"> return $self->$orig( $arg );</td></tr>
+<tr><td class="h"><a name="88"></a>88</td><td class="c3">1</td><td class="c3"><span title="Avg 10µs">10µs</span></td><td class="c3">1</td><td class="c3">233µs</td><td class="s">};<div class="calls"><div class="calls_out"># spent 233µs making 1 call to <a href="Moose-pm-62-sub.html#90">Moose::around</a></div></div></td></tr>
+<tr><td class="h"><a name="89"></a>89</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="90"></a>90</td><td></td><td></td><td></td><td></td><td class="s">=head1 NAME</td></tr>
+<tr><td class="h"><a name="91"></a>91</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="92"></a>92</td><td></td><td></td><td></td><td></td><td class="s">Text::Tradition - a software model for a set of collated texts</td></tr>
+<tr><td class="h"><a name="93"></a>93</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="94"></a>94</td><td></td><td></td><td></td><td></td><td class="s">=head1 SYNOPSIS</td></tr>
+<tr><td class="h"><a name="95"></a>95</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="96"></a>96</td><td></td><td></td><td></td><td></td><td class="s"> use Text::Tradition;</td></tr>
+<tr><td class="h"><a name="97"></a>97</td><td></td><td></td><td></td><td></td><td class="s"> my $t = Text::Tradition->new( </td></tr>
+<tr><td class="h"><a name="98"></a>98</td><td></td><td></td><td></td><td></td><td class="s"> 'name' => 'this is a text',</td></tr>
+<tr><td class="h"><a name="99"></a>99</td><td></td><td></td><td></td><td></td><td class="s"> 'input' => 'TEI',</td></tr>
+<tr><td class="h"><a name="100"></a>100</td><td></td><td></td><td></td><td></td><td class="s"> 'file' => '/path/to/tei_parallel_seg_file.xml' );</td></tr>
+<tr><td class="h"><a name="101"></a>101</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="102"></a>102</td><td></td><td></td><td></td><td></td><td class="s"> my @text_wits = $t->witnesses();</td></tr>
+<tr><td class="h"><a name="103"></a>103</td><td></td><td></td><td></td><td></td><td class="s"> my $manuscript_a = $t->witness( 'A' );</td></tr>
+<tr><td class="h"><a name="104"></a>104</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="105"></a>105</td><td></td><td></td><td></td><td></td><td class="s"> $t = Text::Tradition->new();</td></tr>
+<tr><td class="h"><a name="106"></a>106</td><td></td><td></td><td></td><td></td><td class="s"> $t->add_witness( 'sourcetype' => 'xmldesc', </td></tr>
+<tr><td class="h"><a name="107"></a>107</td><td></td><td></td><td></td><td></td><td class="s"> 'file' => '/path/to/teitranscription.xml' );</td></tr>
+<tr><td class="h"><a name="108"></a>108</td><td></td><td></td><td></td><td></td><td class="s"> $t->add_witness( 'sourcetype => 'plaintext', 'sigil' => 'Q',</td></tr>
+<tr><td class="h"><a name="109"></a>109</td><td></td><td></td><td></td><td></td><td class="s"> 'string' => 'The quick brown fox jumped over the lazy dogs' );</td></tr>
+<tr><td class="h"><a name="110"></a>110</td><td></td><td></td><td></td><td></td><td class="s"> ## TODO</td></tr>
+<tr><td class="h"><a name="111"></a>111</td><td></td><td></td><td></td><td></td><td class="s"> $t->collate_texts;</td></tr>
+<tr><td class="h"><a name="112"></a>112</td><td></td><td></td><td></td><td></td><td class="s"> </td></tr>
+<tr><td class="h"><a name="113"></a>113</td><td></td><td></td><td></td><td></td><td class="s"> my $text_path_svg = $t->collation->as_svg();</td></tr>
+<tr><td class="h"><a name="114"></a>114</td><td></td><td></td><td></td><td></td><td class="s"> ## See Text::Tradition::Collation for more on text collation itself</td></tr>
+<tr><td class="h"><a name="115"></a>115</td><td></td><td></td><td></td><td></td><td class="s"> </td></tr>
+<tr><td class="h"><a name="116"></a>116</td><td></td><td></td><td></td><td></td><td class="s">=head1 DESCRIPTION</td></tr>
+<tr><td class="h"><a name="117"></a>117</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="118"></a>118</td><td></td><td></td><td></td><td></td><td class="s">Text::Tradition is a library for representation and analysis of collated</td></tr>
+<tr><td class="h"><a name="119"></a>119</td><td></td><td></td><td></td><td></td><td class="s">texts, particularly medieval ones. A 'tradition' refers to the aggregation</td></tr>
+<tr><td class="h"><a name="120"></a>120</td><td></td><td></td><td></td><td></td><td class="s">of surviving versions of a text, generally preserved in multiple</td></tr>
+<tr><td class="h"><a name="121"></a>121</td><td></td><td></td><td></td><td></td><td class="s">manuscripts (or 'witnesses'). A Tradition object thus has one more more</td></tr>
+<tr><td class="h"><a name="122"></a>122</td><td></td><td></td><td></td><td></td><td class="s">Witnesses, as well as a Collation that represents the unity of all versions</td></tr>
+<tr><td class="h"><a name="123"></a>123</td><td></td><td></td><td></td><td></td><td class="s">of the text.</td></tr>
+<tr><td class="h"><a name="124"></a>124</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="125"></a>125</td><td></td><td></td><td></td><td></td><td class="s">=head1 METHODS</td></tr>
+<tr><td class="h"><a name="126"></a>126</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="127"></a>127</td><td></td><td></td><td></td><td></td><td class="s">=head2 new</td></tr>
+<tr><td class="h"><a name="128"></a>128</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="129"></a>129</td><td></td><td></td><td></td><td></td><td class="s">Creates and returns a new text tradition object. The following options are</td></tr>
+<tr><td class="h"><a name="130"></a>130</td><td></td><td></td><td></td><td></td><td class="s">accepted.</td></tr>
+<tr><td class="h"><a name="131"></a>131</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="132"></a>132</td><td></td><td></td><td></td><td></td><td class="s">General options:</td></tr>
+<tr><td class="h"><a name="133"></a>133</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="134"></a>134</td><td></td><td></td><td></td><td></td><td class="s">=over 4</td></tr>
+<tr><td class="h"><a name="135"></a>135</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="136"></a>136</td><td></td><td></td><td></td><td></td><td class="s">=item B<name> - The name of the text.</td></tr>
+<tr><td class="h"><a name="137"></a>137</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="138"></a>138</td><td></td><td></td><td></td><td></td><td class="s">=back</td></tr>
+<tr><td class="h"><a name="139"></a>139</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="140"></a>140</td><td></td><td></td><td></td><td></td><td class="s">Initialization based on a collation file:</td></tr>
+<tr><td class="h"><a name="141"></a>141</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="142"></a>142</td><td></td><td></td><td></td><td></td><td class="s">=over 4</td></tr>
+<tr><td class="h"><a name="143"></a>143</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="144"></a>144</td><td></td><td></td><td></td><td></td><td class="s">=item B<input> - The input format of the collation file. Can be one of the</td></tr>
+<tr><td class="h"><a name="145"></a>145</td><td></td><td></td><td></td><td></td><td class="s">following:</td></tr>
+<tr><td class="h"><a name="146"></a>146</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="147"></a>147</td><td></td><td></td><td></td><td></td><td class="s">=over 4</td></tr>
+<tr><td class="h"><a name="148"></a>148</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="149"></a>149</td><td></td><td></td><td></td><td></td><td class="s">=item * Self - a GraphML format produced by this module</td></tr>
+<tr><td class="h"><a name="150"></a>150</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="151"></a>151</td><td></td><td></td><td></td><td></td><td class="s">=item * CollateX - a GraphML format produced by CollateX</td></tr>
+<tr><td class="h"><a name="152"></a>152</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="153"></a>153</td><td></td><td></td><td></td><td></td><td class="s">=item * CTE - a TEI XML format produced by Classical Text Editor</td></tr>
+<tr><td class="h"><a name="154"></a>154</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="155"></a>155</td><td></td><td></td><td></td><td></td><td class="s">=item * JSON - an alignment table in JSON format, as produced by CollateX and other tools</td></tr>
+<tr><td class="h"><a name="156"></a>156</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="157"></a>157</td><td></td><td></td><td></td><td></td><td class="s">=item * KUL - a specific CSV format for variants, not documented here</td></tr>
+<tr><td class="h"><a name="158"></a>158</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="159"></a>159</td><td></td><td></td><td></td><td></td><td class="s">=item * TEI - a TEI parallel segmentation format file</td></tr>
+<tr><td class="h"><a name="160"></a>160</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="161"></a>161</td><td></td><td></td><td></td><td></td><td class="s">=item * Tabular - a comma- or tab-separated collation. Takes an additional</td></tr>
+<tr><td class="h"><a name="162"></a>162</td><td></td><td></td><td></td><td></td><td class="s">option, 'sep_char', which defaults to the tab character.</td></tr>
+<tr><td class="h"><a name="163"></a>163</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="164"></a>164</td><td></td><td></td><td></td><td></td><td class="s">=back</td></tr>
+<tr><td class="h"><a name="165"></a>165</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="166"></a>166</td><td></td><td></td><td></td><td></td><td class="s">=item B<file> - The name of the file that contains the data. One of 'file'</td></tr>
+<tr><td class="h"><a name="167"></a>167</td><td></td><td></td><td></td><td></td><td class="s">or 'string' should be specified.</td></tr>
+<tr><td class="h"><a name="168"></a>168</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="169"></a>169</td><td></td><td></td><td></td><td></td><td class="s">=item B<string> - A text string that contains the data. One of 'file' or</td></tr>
+<tr><td class="h"><a name="170"></a>170</td><td></td><td></td><td></td><td></td><td class="s">'string' should be specified.</td></tr>
+<tr><td class="h"><a name="171"></a>171</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="172"></a>172</td><td></td><td></td><td></td><td></td><td class="s">=item B<base> - The name of a text file that contains the base text, to be</td></tr>
+<tr><td class="h"><a name="173"></a>173</td><td></td><td></td><td></td><td></td><td class="s">used with input formats that require it (currently only KUL).</td></tr>
+<tr><td class="h"><a name="174"></a>174</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="175"></a>175</td><td></td><td></td><td></td><td></td><td class="s">=back</td></tr>
+<tr><td class="h"><a name="176"></a>176</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="177"></a>177</td><td></td><td></td><td></td><td></td><td class="s">Initialization based on a list of witnesses [NOT YET IMPLEMENTED]:</td></tr>
+<tr><td class="h"><a name="178"></a>178</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="179"></a>179</td><td></td><td></td><td></td><td></td><td class="s">=over 4</td></tr>
+<tr><td class="h"><a name="180"></a>180</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="181"></a>181</td><td></td><td></td><td></td><td></td><td class="s">=item B<witnesses> - A reference to an array of Text::Tradition::Witness</td></tr>
+<tr><td class="h"><a name="182"></a>182</td><td></td><td></td><td></td><td></td><td class="s">objects that carry the text to be collated.</td></tr>
+<tr><td class="h"><a name="183"></a>183</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="184"></a>184</td><td></td><td></td><td></td><td></td><td class="s">=item B<collator> - A reference to a collation program that will accept</td></tr>
+<tr><td class="h"><a name="185"></a>185</td><td></td><td></td><td></td><td></td><td class="s">Witness objects.</td></tr>
+<tr><td class="h"><a name="186"></a>186</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="187"></a>187</td><td></td><td></td><td></td><td></td><td class="s">=back</td></tr>
+<tr><td class="h"><a name="188"></a>188</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="189"></a>189</td><td></td><td></td><td></td><td></td><td class="s">=head2 B<witnesses></td></tr>
+<tr><td class="h"><a name="190"></a>190</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="191"></a>191</td><td></td><td></td><td></td><td></td><td class="s">Return the Text::Tradition::Witness objects associated with this tradition,</td></tr>
+<tr><td class="h"><a name="192"></a>192</td><td></td><td></td><td></td><td></td><td class="s">as an array.</td></tr>
+<tr><td class="h"><a name="193"></a>193</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="194"></a>194</td><td></td><td></td><td></td><td></td><td class="s">=head2 B<witness>( $sigil )</td></tr>
+<tr><td class="h"><a name="195"></a>195</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="196"></a>196</td><td></td><td></td><td></td><td></td><td class="s">Returns the Text::Tradition::Witness object whose sigil is $sigil, or undef</td></tr>
+<tr><td class="h"><a name="197"></a>197</td><td></td><td></td><td></td><td></td><td class="s">if there is no such object within the tradition.</td></tr>
+<tr><td class="h"><a name="198"></a>198</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="199"></a>199</td><td></td><td></td><td></td><td></td><td class="s">=head2 B<add_witness>( %opts )</td></tr>
+<tr><td class="h"><a name="200"></a>200</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="201"></a>201</td><td></td><td></td><td></td><td></td><td class="s">Instantiate a new witness with the given options (see documentation for</td></tr>
+<tr><td class="h"><a name="202"></a>202</td><td></td><td></td><td></td><td></td><td class="s">Text::Tradition::Witness) and add it to the tradition.</td></tr>
+<tr><td class="h"><a name="203"></a>203</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="204"></a>204</td><td></td><td></td><td></td><td></td><td class="s">=head2 B<del_witness>( $sigil )</td></tr>
+<tr><td class="h"><a name="205"></a>205</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="206"></a>206</td><td></td><td></td><td></td><td></td><td class="s">Delete the witness with the given sigil from the tradition. Returns the</td></tr>
+<tr><td class="h"><a name="207"></a>207</td><td></td><td></td><td></td><td></td><td class="s">witness object for the deleted witness.</td></tr>
+<tr><td class="h"><a name="208"></a>208</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="209"></a>209</td><td></td><td></td><td></td><td></td><td class="s">=begin testing</td></tr>
+<tr><td class="h"><a name="210"></a>210</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="211"></a>211</td><td></td><td></td><td></td><td></td><td class="s">use_ok( 'Text::Tradition', "can use module" );</td></tr>
+<tr><td class="h"><a name="212"></a>212</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="213"></a>213</td><td></td><td></td><td></td><td></td><td class="s">my $t = Text::Tradition->new( 'name' => 'empty' );</td></tr>
+<tr><td class="h"><a name="214"></a>214</td><td></td><td></td><td></td><td></td><td class="s">is( ref( $t ), 'Text::Tradition', "initialized an empty Tradition object" );</td></tr>
+<tr><td class="h"><a name="215"></a>215</td><td></td><td></td><td></td><td></td><td class="s">is( $t->name, 'empty', "object has the right name" );</td></tr>
+<tr><td class="h"><a name="216"></a>216</td><td></td><td></td><td></td><td></td><td class="s">is( scalar $t->witnesses, 0, "object has no witnesses" );</td></tr>
+<tr><td class="h"><a name="217"></a>217</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="218"></a>218</td><td></td><td></td><td></td><td></td><td class="s">my $simple = 't/data/simple.txt';</td></tr>
+<tr><td class="h"><a name="219"></a>219</td><td></td><td></td><td></td><td></td><td class="s">my $s = Text::Tradition->new( </td></tr>
+<tr><td class="h"><a name="220"></a>220</td><td></td><td></td><td></td><td></td><td class="s"> 'name' => 'inline', </td></tr>
+<tr><td class="h"><a name="221"></a>221</td><td></td><td></td><td></td><td></td><td class="s"> 'input' => 'Tabular',</td></tr>
+<tr><td class="h"><a name="222"></a>222</td><td></td><td></td><td></td><td></td><td class="s"> 'file' => $simple,</td></tr>
+<tr><td class="h"><a name="223"></a>223</td><td></td><td></td><td></td><td></td><td class="s"> );</td></tr>
+<tr><td class="h"><a name="224"></a>224</td><td></td><td></td><td></td><td></td><td class="s">is( ref( $s ), 'Text::Tradition', "initialized a Tradition object" );</td></tr>
+<tr><td class="h"><a name="225"></a>225</td><td></td><td></td><td></td><td></td><td class="s">is( $s->name, 'inline', "object has the right name" );</td></tr>
+<tr><td class="h"><a name="226"></a>226</td><td></td><td></td><td></td><td></td><td class="s">is( scalar $s->witnesses, 3, "object has three witnesses" );</td></tr>
+<tr><td class="h"><a name="227"></a>227</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="228"></a>228</td><td></td><td></td><td></td><td></td><td class="s">my $wit_a = $s->witness('A');</td></tr>
+<tr><td class="h"><a name="229"></a>229</td><td></td><td></td><td></td><td></td><td class="s">is( ref( $wit_a ), 'Text::Tradition::Witness', "Found a witness A" );</td></tr>
+<tr><td class="h"><a name="230"></a>230</td><td></td><td></td><td></td><td></td><td class="s">if( $wit_a ) {</td></tr>
+<tr><td class="h"><a name="231"></a>231</td><td></td><td></td><td></td><td></td><td class="s"> is( $wit_a->sigil, 'A', "Witness A has the right sigil" );</td></tr>
+<tr><td class="h"><a name="232"></a>232</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
+<tr><td class="h"><a name="233"></a>233</td><td></td><td></td><td></td><td></td><td class="s">is( $s->witness('X'), undef, "There is no witness X" );</td></tr>
+<tr><td class="h"><a name="234"></a>234</td><td></td><td></td><td></td><td></td><td class="s">ok( !exists $s->{'witnesses'}->{'X'}, "Witness key X not created" );</td></tr>
+<tr><td class="h"><a name="235"></a>235</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="236"></a>236</td><td></td><td></td><td></td><td></td><td class="s">my $wit_d = $s->add_witness( 'sigil' => 'D', 'sourcetype' => 'collation' );</td></tr>
+<tr><td class="h"><a name="237"></a>237</td><td></td><td></td><td></td><td></td><td class="s">is( ref( $wit_d ), 'Text::Tradition::Witness', "new witness created" );</td></tr>
+<tr><td class="h"><a name="238"></a>238</td><td></td><td></td><td></td><td></td><td class="s">is( $wit_d->sigil, 'D', "witness has correct sigil" );</td></tr>
+<tr><td class="h"><a name="239"></a>239</td><td></td><td></td><td></td><td></td><td class="s">is( scalar $s->witnesses, 4, "object now has four witnesses" );</td></tr>
+<tr><td class="h"><a name="240"></a>240</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="241"></a>241</td><td></td><td></td><td></td><td></td><td class="s">my $del = $s->del_witness( 'D' );</td></tr>
+<tr><td class="h"><a name="242"></a>242</td><td></td><td></td><td></td><td></td><td class="s">is( $del, $wit_d, "Deleted correct witness" );</td></tr>
+<tr><td class="h"><a name="243"></a>243</td><td></td><td></td><td></td><td></td><td class="s">is( scalar $s->witnesses, 3, "object has three witnesses again" );</td></tr>
+<tr><td class="h"><a name="244"></a>244</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="245"></a>245</td><td></td><td></td><td></td><td></td><td class="s"># TODO test initialization by witness list when we have it</td></tr>
+<tr><td class="h"><a name="246"></a>246</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="247"></a>247</td><td></td><td></td><td></td><td></td><td class="s">=end testing</td></tr>
+<tr><td class="h"><a name="248"></a>248</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="249"></a>249</td><td></td><td></td><td></td><td></td><td class="s">=cut</td></tr>
+<tr><td class="h"><a name="250"></a>250</td><td></td><td></td><td></td><td></td><td class="s"> </td></tr>
+<tr><td class="h"><a name="251"></a>251</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="252"></a>252</td><td></td><td></td><td></td><td></td><td class="s"><div class="calls"><div class="calls_in"># spent 35.8s (61µs+35.8) within Text::Tradition::BUILD which was called:
+# once (61µs+35.8s) by Text::Tradition::new at <a href="(eval 83)[Eval-Closure-pm-125]-192-line.html#92">line 92 of (eval 83)[Eval/Closure.pm:125]</a></div></div>sub BUILD {</td></tr>
+<tr><td class="h"><a name="253"></a>253</td><td class="c0">16</td><td class="c3"><span title="Avg 3µs">43µs</span></td><td></td><td></td><td class="s"> my( $self, $init_args ) = @_;</td></tr>
+<tr><td class="h"><a name="254"></a>254</td><td></td><td></td><td></td><td></td><td class="s"> </td></tr>
+<tr><td class="h"><a name="255"></a>255</td><td></td><td></td><td></td><td></td><td class="s"> # First, make a collation object. This will use only those arguments in</td></tr>
+<tr><td class="h"><a name="256"></a>256</td><td></td><td></td><td></td><td></td><td class="s"> # init_args that apply to the collation.</td></tr>
+<tr><td class="h"><a name="257"></a>257</td><td></td><td></td><td class="c3">1</td><td class="c3">1.37ms</td><td class="s"> my $collation = Text::Tradition::Collation->new( %$init_args,<div class="calls"><div class="calls_out"> # spent 1.37ms making 1 call to <a href="Class-MOP-Package-pm-122-sub.html#221">Text::Tradition::Collation::new</a></div></div></td></tr>
+<tr><td class="h"><a name="258"></a>258</td><td></td><td></td><td></td><td></td><td class="s"> 'tradition' => $self );</td></tr>
+<tr><td class="h"><a name="259"></a>259</td><td></td><td></td><td class="c3">1</td><td class="c3">10µs</td><td class="s"> $self->_save_collation( $collation );<div class="calls"><div class="calls_out"> # spent 10µs making 1 call to <a href="Class-MOP-Package-pm-122-sub.html#221">Text::Tradition::_save_collation</a></div></div></td></tr>
+<tr><td class="h"><a name="260"></a>260</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="261"></a>261</td><td></td><td></td><td></td><td></td><td class="s"> if( exists $init_args->{'input'} ) {</td></tr>
+<tr><td class="h"><a name="262"></a>262</td><td></td><td></td><td></td><td></td><td class="s"> # Call the appropriate parser on the given data</td></tr>
+<tr><td class="h"><a name="263"></a>263</td><td></td><td></td><td></td><td></td><td class="s"> my @format_standalone = qw/ Self CollateText CollateX CTE JSON TEI Tabular /;</td></tr>
+<tr><td class="h"><a name="264"></a>264</td><td></td><td></td><td></td><td></td><td class="s"> my @format_basetext = qw/ KUL /;</td></tr>
+<tr><td class="h"><a name="265"></a>265</td><td></td><td></td><td></td><td></td><td class="s"> my $use_base;</td></tr>
+<tr><td class="h"><a name="266"></a>266</td><td></td><td></td><td></td><td></td><td class="s"> my $format = $init_args->{'input'};</td></tr>
+<tr><td class="h"><a name="267"></a>267</td><td></td><td></td><td></td><td></td><td class="s"> if( $format && !( grep { $_ eq $format } @format_standalone )</td></tr>
+<tr><td class="h"><a name="268"></a>268</td><td></td><td></td><td></td><td></td><td class="s"> && !( grep { $_ eq $format } @format_basetext ) ) {</td></tr>
+<tr><td class="h"><a name="269"></a>269</td><td></td><td></td><td></td><td></td><td class="s"> warn "Unrecognized input format $format; not parsing";</td></tr>
+<tr><td class="h"><a name="270"></a>270</td><td></td><td></td><td></td><td></td><td class="s"> return;</td></tr>
+<tr><td class="h"><a name="271"></a>271</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="272"></a>272</td><td></td><td></td><td></td><td></td><td class="s"> if( $format && grep { $_ eq $format } @format_basetext ) {</td></tr>
+<tr><td class="h"><a name="273"></a>273</td><td></td><td></td><td></td><td></td><td class="s"> $use_base = 1;</td></tr>
+<tr><td class="h"><a name="274"></a>274</td><td></td><td></td><td></td><td></td><td class="s"> if( !exists $init_args->{'base'} ) {</td></tr>
+<tr><td class="h"><a name="275"></a>275</td><td></td><td></td><td></td><td></td><td class="s"> warn "Cannot make a collation from $format without a base text";</td></tr>
+<tr><td class="h"><a name="276"></a>276</td><td></td><td></td><td></td><td></td><td class="s"> return;</td></tr>
+<tr><td class="h"><a name="277"></a>277</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="278"></a>278</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="279"></a>279</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="280"></a>280</td><td></td><td></td><td></td><td></td><td class="s"> # Now do the parsing. </td></tr>
+<tr><td class="h"><a name="281"></a>281</td><td></td><td></td><td></td><td></td><td class="s"> if( $format ) {</td></tr>
+<tr><td class="h"><a name="282"></a>282</td><td></td><td></td><td></td><td></td><td class="s"> if( $use_base ) { </td></tr>
+<tr><td class="h"><a name="283"></a>283</td><td></td><td></td><td></td><td></td><td class="s"> $format = 'BaseText'; # Use the BaseText module for parsing,</td></tr>
+<tr><td class="h"><a name="284"></a>284</td><td></td><td></td><td></td><td></td><td class="s"> # but retain the original input arg.</td></tr>
+<tr><td class="h"><a name="285"></a>285</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="286"></a>286</td><td></td><td></td><td></td><td></td><td class="s"> my $mod = "Text::Tradition::Parser::$format";</td></tr>
+<tr><td class="h"><a name="287"></a>287</td><td></td><td></td><td class="c3">1</td><td class="c0">23.0ms</td><td class="s"> load( $mod );<div class="calls"><div class="calls_out"> # spent 23.0ms making 1 call to <a href="Module-Load-pm-683-sub.html#16">Module::Load::load</a></div></div></td></tr>
+<tr><td class="h"><a name="288"></a>288</td><td></td><td></td><td class="c3">2</td><td class="c0">35.7s</td><td class="s"> $mod->can('parse')->( $self, $init_args );<div class="calls"><div class="calls_out"> # spent 35.7s making 1 call to <a href="lib-Text-Tradition-Parser-Self-pm-2520-sub.html#144">Text::Tradition::Parser::Self::parse</a>
+ # spent 3µs making 1 call to <a href="UNIVERSAL-pm-738-sub.html#UNIVERSAL__can">UNIVERSAL::can</a></div></div></td></tr>
+<tr><td class="h"><a name="289"></a>289</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="290"></a>290</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="291"></a>291</td><td></td><td></td><td></td><td></td><td class="s"> return $self;</td></tr>
+<tr><td class="h"><a name="292"></a>292</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
+<tr><td class="h"><a name="293"></a>293</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="294"></a>294</td><td></td><td></td><td></td><td></td><td class="s">=head2 add_json_witnesses( $jsonstring, $options )</td></tr>
+<tr><td class="h"><a name="295"></a>295</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="296"></a>296</td><td></td><td></td><td></td><td></td><td class="s">Adds a set of witnesses from a JSON array specification. This is a wrapper</td></tr>
+<tr><td class="h"><a name="297"></a>297</td><td></td><td></td><td></td><td></td><td class="s">to parse the JSON and call add_witness (with the specified $options) for</td></tr>
+<tr><td class="h"><a name="298"></a>298</td><td></td><td></td><td></td><td></td><td class="s">each element therein.</td></tr>
+<tr><td class="h"><a name="299"></a>299</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="300"></a>300</td><td></td><td></td><td></td><td></td><td class="s">=cut</td></tr>
+<tr><td class="h"><a name="301"></a>301</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="302"></a>302</td><td></td><td></td><td></td><td></td><td class="s">sub add_json_witnesses {</td></tr>
+<tr><td class="h"><a name="303"></a>303</td><td></td><td></td><td></td><td></td><td class="s"> my( $self, $jsonstr, $extraopts ) = @_;</td></tr>
+<tr><td class="h"><a name="304"></a>304</td><td></td><td></td><td></td><td></td><td class="s"> my $witarray = from_json( $jsonstr );</td></tr>
+<tr><td class="h"><a name="305"></a>305</td><td></td><td></td><td></td><td></td><td class="s"> foreach my $witspec ( @{$witarray->{witnesses}} ) {</td></tr>
+<tr><td class="h"><a name="306"></a>306</td><td></td><td></td><td></td><td></td><td class="s"> my $opts = $extraopts || {};</td></tr>
+<tr><td class="h"><a name="307"></a>307</td><td></td><td></td><td></td><td></td><td class="s"> $opts->{'sourcetype'} = 'json';</td></tr>
+<tr><td class="h"><a name="308"></a>308</td><td></td><td></td><td></td><td></td><td class="s"> $opts->{'object'} = $witspec;</td></tr>
+<tr><td class="h"><a name="309"></a>309</td><td></td><td></td><td></td><td></td><td class="s"> $self->add_witness( $opts );</td></tr>
+<tr><td class="h"><a name="310"></a>310</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="311"></a>311</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
+<tr><td class="h"><a name="312"></a>312</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="313"></a>313</td><td></td><td></td><td></td><td></td><td class="s">=head2 add_stemma( $dotfile )</td></tr>
+<tr><td class="h"><a name="314"></a>314</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="315"></a>315</td><td></td><td></td><td></td><td></td><td class="s">Initializes a Text::Tradition::Stemma object from the given dotfile,</td></tr>
+<tr><td class="h"><a name="316"></a>316</td><td></td><td></td><td></td><td></td><td class="s">and associates it with the tradition.</td></tr>
+<tr><td class="h"><a name="317"></a>317</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="318"></a>318</td><td></td><td></td><td></td><td></td><td class="s">=begin testing</td></tr>
+<tr><td class="h"><a name="319"></a>319</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="320"></a>320</td><td></td><td></td><td></td><td></td><td class="s">use Text::Tradition;</td></tr>
+<tr><td class="h"><a name="321"></a>321</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="322"></a>322</td><td></td><td></td><td></td><td></td><td class="s">my $t = Text::Tradition->new( </td></tr>
+<tr><td class="h"><a name="323"></a>323</td><td></td><td></td><td></td><td></td><td class="s"> 'name' => 'simple test', </td></tr>
+<tr><td class="h"><a name="324"></a>324</td><td></td><td></td><td></td><td></td><td class="s"> 'input' => 'Tabular',</td></tr>
+<tr><td class="h"><a name="325"></a>325</td><td></td><td></td><td></td><td></td><td class="s"> 'file' => 't/data/simple.txt',</td></tr>
+<tr><td class="h"><a name="326"></a>326</td><td></td><td></td><td></td><td></td><td class="s"> );</td></tr>
+<tr><td class="h"><a name="327"></a>327</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="328"></a>328</td><td></td><td></td><td></td><td></td><td class="s">is( $t->stemma_count, 0, "No stemmas added yet" );</td></tr>
+<tr><td class="h"><a name="329"></a>329</td><td></td><td></td><td></td><td></td><td class="s">my $s;</td></tr>
+<tr><td class="h"><a name="330"></a>330</td><td></td><td></td><td></td><td></td><td class="s">ok( $s = $t->add_stemma( dotfile => 't/data/simple.dot' ), "Added a simple stemma" );</td></tr>
+<tr><td class="h"><a name="331"></a>331</td><td></td><td></td><td></td><td></td><td class="s">is( ref( $s ), 'Text::Tradition::Stemma', "Got a stemma object returned" );</td></tr>
+<tr><td class="h"><a name="332"></a>332</td><td></td><td></td><td></td><td></td><td class="s">is( $t->stemma_count, 1, "Tradition claims to have a stemma" );</td></tr>
+<tr><td class="h"><a name="333"></a>333</td><td></td><td></td><td></td><td></td><td class="s">is( $t->stemma(0), $s, "Tradition hands back the right stemma" );</td></tr>
+<tr><td class="h"><a name="334"></a>334</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="335"></a>335</td><td></td><td></td><td></td><td></td><td class="s">=end testing</td></tr>
+<tr><td class="h"><a name="336"></a>336</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="337"></a>337</td><td></td><td></td><td></td><td></td><td class="s">=cut</td></tr>
+<tr><td class="h"><a name="338"></a>338</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="339"></a>339</td><td></td><td></td><td></td><td></td><td class="s">sub add_stemma {</td></tr>
+<tr><td class="h"><a name="340"></a>340</td><td></td><td></td><td></td><td></td><td class="s"> my $self = shift;</td></tr>
+<tr><td class="h"><a name="341"></a>341</td><td></td><td></td><td></td><td></td><td class="s"> my %opts = @_;</td></tr>
+<tr><td class="h"><a name="342"></a>342</td><td></td><td></td><td></td><td></td><td class="s"> my $stemma_fh;</td></tr>
+<tr><td class="h"><a name="343"></a>343</td><td></td><td></td><td></td><td></td><td class="s"> if( $opts{'dotfile'} ) {</td></tr>
+<tr><td class="h"><a name="344"></a>344</td><td></td><td></td><td></td><td></td><td class="s"> open $stemma_fh, '<', $opts{'dotfile'}</td></tr>
+<tr><td class="h"><a name="345"></a>345</td><td></td><td></td><td></td><td></td><td class="s"> or warn "Could not open file " . $opts{'dotfile'};</td></tr>
+<tr><td class="h"><a name="346"></a>346</td><td></td><td></td><td></td><td></td><td class="s"> } elsif( $opts{'dot'} ) {</td></tr>
+<tr><td class="h"><a name="347"></a>347</td><td></td><td></td><td></td><td></td><td class="s"> my $str = $opts{'dot'};</td></tr>
+<tr><td class="h"><a name="348"></a>348</td><td></td><td></td><td></td><td></td><td class="s"> open $stemma_fh, '<', \$str;</td></tr>
+<tr><td class="h"><a name="349"></a>349</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="350"></a>350</td><td></td><td></td><td></td><td></td><td class="s"> # Assume utf-8</td></tr>
+<tr><td class="h"><a name="351"></a>351</td><td></td><td></td><td></td><td></td><td class="s"> binmode $stemma_fh, ':utf8';</td></tr>
+<tr><td class="h"><a name="352"></a>352</td><td></td><td></td><td></td><td></td><td class="s"> my $stemma = Text::Tradition::Stemma->new( </td></tr>
+<tr><td class="h"><a name="353"></a>353</td><td></td><td></td><td></td><td></td><td class="s"> 'collation' => $self->collation,</td></tr>
+<tr><td class="h"><a name="354"></a>354</td><td></td><td></td><td></td><td></td><td class="s"> 'dot' => $stemma_fh );</td></tr>
+<tr><td class="h"><a name="355"></a>355</td><td></td><td></td><td></td><td></td><td class="s"> $self->_add_stemma( $stemma ) if $stemma;</td></tr>
+<tr><td class="h"><a name="356"></a>356</td><td></td><td></td><td></td><td></td><td class="s"> return $stemma;</td></tr>
+<tr><td class="h"><a name="357"></a>357</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
+<tr><td class="h"><a name="358"></a>358</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="359"></a>359</td><td></td><td></td><td></td><td></td><td class="s">sub lemmatize {</td></tr>
+<tr><td class="h"><a name="360"></a>360</td><td></td><td></td><td></td><td></td><td class="s"> my $self = shift;</td></tr>
+<tr><td class="h"><a name="361"></a>361</td><td></td><td></td><td></td><td></td><td class="s"> unless( $self->has_language ) {</td></tr>
+<tr><td class="h"><a name="362"></a>362</td><td></td><td></td><td></td><td></td><td class="s"> warn "Please set a language to lemmatize a tradition";</td></tr>
+<tr><td class="h"><a name="363"></a>363</td><td></td><td></td><td></td><td></td><td class="s"> return;</td></tr>
+<tr><td class="h"><a name="364"></a>364</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
+<tr><td class="h"><a name="365"></a>365</td><td></td><td></td><td></td><td></td><td class="s"> my $mod = "Text::Tradition::Language::" . $self->language;</td></tr>
+<tr><td class="h"><a name="366"></a>366</td><td></td><td></td><td></td><td></td><td class="s"> load( $mod );</td></tr>
+<tr><td class="h"><a name="367"></a>367</td><td></td><td></td><td></td><td></td><td class="s"> $mod->can( 'lemmatize' )->( $self );</td></tr>
+<tr><td class="h"><a name="368"></a>368</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
+<tr><td class="h"><a name="369"></a>369</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="370"></a>370</td><td class="c1">2</td><td class="c3"><span title="Avg 27µs">54µs</span></td><td class="c3">2</td><td class="c3">202µs</td><td class="s"><div class="calls"><div class="calls_in"># spent 106µs (10+96) within Text::Tradition::BEGIN@370 which was called:
+# once (10µs+96µs) by main::BEGIN@10 at <a href="lib-Text-Tradition-pm-673-sub.html#370">line 370</a></div></div>no Moose;<div class="calls"><div class="calls_out"># spent 106µs making 1 call to <a href="lib-Text-Tradition-pm-673-sub.html#370">Text::Tradition::BEGIN@370</a>
+# spent 96µs making 1 call to <a href="Moose-Exporter-pm-82-sub.html#670">Moose::Exporter::__ANON__[Moose/Exporter.pm:678]</a></div></div></td></tr>
+<tr><td class="h"><a name="371"></a>371</td><td class="c3">1</td><td class="c0"><span title="Avg 127µs">127µs</span></td><td class="c3">2</td><td class="c1">7.20ms</td><td class="s">__PACKAGE__->meta->make_immutable;<div class="calls"><div class="calls_out"># spent 7.18ms making 1 call to <a href="Class-MOP-Class-pm-103-sub.html#1280">Class::MOP::Class::make_immutable</a>
+# spent 18µs making 1 call to <a href="Class-MOP-Package-pm-122-sub.html#221">Text::Tradition::meta</a></div></div></td></tr>
+<tr><td class="h"><a name="372"></a>372</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="373"></a>373</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="374"></a>374</td><td></td><td></td><td></td><td></td><td class="s">=head1 BUGS / TODO</td></tr>
+<tr><td class="h"><a name="375"></a>375</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="376"></a>376</td><td></td><td></td><td></td><td></td><td class="s">=over</td></tr>
+<tr><td class="h"><a name="377"></a>377</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="378"></a>378</td><td></td><td></td><td></td><td></td><td class="s">=item * Allow tradition to be initialized via passing to a collator.</td></tr>
+<tr><td class="h"><a name="379"></a>379</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="380"></a>380</td><td></td><td></td><td></td><td></td><td class="s">=back</td></tr>
+<tr><td class="h"><a name="381"></a>381</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="382"></a>382</td><td></td><td></td><td></td><td></td><td class="s">=head1 LICENSE</td></tr>
+<tr><td class="h"><a name="383"></a>383</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="384"></a>384</td><td></td><td></td><td></td><td></td><td class="s">This package is free software and is provided "as is" without express</td></tr>
+<tr><td class="h"><a name="385"></a>385</td><td></td><td></td><td></td><td></td><td class="s">or implied warranty. You can redistribute it and/or modify it under</td></tr>
+<tr><td class="h"><a name="386"></a>386</td><td></td><td></td><td></td><td></td><td class="s">the same terms as Perl itself.</td></tr>
+<tr><td class="h"><a name="387"></a>387</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="388"></a>388</td><td></td><td></td><td></td><td></td><td class="s">=head1 AUTHOR</td></tr>
+<tr><td class="h"><a name="389"></a>389</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
+<tr><td class="h"><a name="390"></a>390</td><td></td><td></td><td></td><td></td><td class="s">Tara L Andrews E<lt>aurum@cpan.orgE<gt></td></tr>
+</tbody></table></div>
+
+ <script type="text/javascript"> $(document).ready(function() {
+
+ $("#subs_table").tablesorter({
+ sortList: [[3,1]],
+ headers: {
+ 3: { sorter: 'fmt_time' },
+ 4: { sorter: 'fmt_time' }
+ }
+ });
+
+ } ); </script>
+
+ <div class="footer">Report produced by the
+ <a href="http://search.cpan.org/dist/Devel-NYTProf/">NYTProf 4.06</a>
+ Perl profiler, developed by
+ <a href="http://www.linkedin.com/in/timbunce">Tim Bunce</a> and
+ <a href="http://code.nytimes.com">Adam Kaplan</a>.
+ </div>
+ <br /><br /><br /><br /><br /><br /><br /><br /><br /><br />
+ </body></html>
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projects / scpubgit/stemmatology.git / blobdiff