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57 <span class="siteSubtitle">Run on Thu May 31 16:49:15 2012<br />Reported on Thu May 31 16:52:40 2012</span>
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111
112<div class="body_content"><br />
113<table class="file_summary"><tr><td class="h">Filename</td><td align="left"><a href="file:///Users/edenc/perl5/lib/perl5/Bio/Phylo/Util/Exceptions.pm">/Users/edenc/perl5/lib/perl5/Bio/Phylo/Util/Exceptions.pm</a></td></tr>
114<tr><td class="h">Statements</td><td align="left">Executed 119 statements in 2.53ms</td></tr></table>
115
116 <table id="subs_table" border="1" cellpadding="0" class="tablesorter">
117 <caption>Subroutines</caption>
118 <thead>
119 <tr>
120 <th>Calls</th>
121 <th><span title="Number of Places sub is called from">P</span></th>
122 <th><span title="Number of Files sub is called from">F</span></th>
123 <th>Exclusive<br />Time</th>
124 <th>Inclusive<br />Time</th>
125 <th>Subroutine</th>
126 </tr>
127 </thead>
128 <tbody>
129<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c0"><span title="0.0%">3.06ms</span></td><td class="c0"><span title="0.0%">3.96ms</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::_make_exceptions</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#113">_make_exceptions</a></span></td></tr>
130<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c0"><span title="0.0%">426&micro;s</span></td><td class="c0"><span title="0.0%">449&micro;s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::BEGIN@4</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#4">BEGIN@4</a></span></td></tr>
131<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">15&micro;s</span></td><td class="c3"><span title="0.0%">57&micro;s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::BEGIN@6</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#6">BEGIN@6</a></span></td></tr>
132<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">14&micro;s</span></td><td class="c3"><span title="0.0%">17&micro;s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::BEGIN@2</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#2">BEGIN@2</a></span></td></tr>
133<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">10&micro;s</span></td><td class="c3"><span title="0.0%">53&micro;s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::BEGIN@5</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#5">BEGIN@5</a></span></td></tr>
134<tr><td class="c3">1</td><td class="c3">1</td><td class="c3">1</td><td class="c3"><span title="0.0%">8&micro;s</span></td><td class="c3"><span title="0.0%">77&micro;s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::BEGIN@3</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#3">BEGIN@3</a></span></td></tr>
135<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::AUTOLOAD</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#106">AUTOLOAD</a></span></td></tr>
136<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::__ANON__[:6]</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#6">__ANON__[:6]</a></span></td></tr>
137<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::as_string</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#28">as_string</a></span></td></tr>
138<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::caught</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#91">caught</a></span></td></tr>
139<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::new</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#9">new</a></span></td></tr>
140<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::rethrow</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#86">rethrow</a></span></td></tr>
141<tr><td class="c3">0</td><td class="c3">0</td><td class="c3">0</td><td class="c3"><span title="0.0%">0s</span></td><td class="c3"><span title="0.0%">0s</span></td><td class="sub_name"><span style="display: none;">Bio::Phylo::Util::Exceptions::::throw</span>Bio::Phylo::Util::Exceptions::<a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#52">throw</a></span></td></tr>
142</tbody></table>
143 Call graph for these subroutines as a
144 <a href="http://en.wikipedia.org/wiki/Graphviz">Graphviz</a>
145 <a href="Users-edenc-perl5-lib-perl5-Bio-Phylo-Util-Exceptions-pm.dot">dot language file</a>.
146
147 <table border="1" cellpadding="0">
148 <thead>
149 <tr><th>Line</th>
150 <th><span title="Number of statements executed">State<br />ments</span></th>
151 <th><span title="Time spend executing statements on the line,
152 excluding time spent executing statements in any called subroutines">Time<br />on line</span></th>
153 <th><span title="Number of subroutines calls">Calls</span></th>
154 <th><span title="Time spent in subroutines called (inclusive)">Time<br />in subs</span></th>
155 <th class="left_indent_header">Code</th>
156 </tr>
157
158 </thead>
159 <tbody>
160 <tr><td class="h"><a name="1"></a>1</td><td></td><td></td><td></td><td></td><td class="s">package Bio::Phylo::Util::Exceptions;</td></tr>
161<tr><td class="h"><a name="2"></a>2</td><td class="c3">2</td><td class="c3"><span title="Avg 13&micro;s">26&micro;s</span></td><td class="c3">2</td><td class="c3">20&micro;s</td><td class="s"><div class="calls"><div class="calls_in"># spent 17&micro;s (14+3) within Bio::Phylo::Util::Exceptions::BEGIN@2 which was called:
162# once (14&micro;s+3&micro;s) by Bio::Phylo::Identifiable::BEGIN@3 at <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#2">line 2</a></div></div>use strict;<div class="calls"><div class="calls_out"># spent 17&micro;s making 1 call to <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#2">Bio::Phylo::Util::Exceptions::BEGIN@2</a>
163# spent 3&micro;s making 1 call to <a href="strict-pm-3-block.html#34">strict::import</a></div></div></td></tr>
164<tr><td class="h"><a name="3"></a>3</td><td class="c3">2</td><td class="c3"><span title="Avg 13&micro;s">27&micro;s</span></td><td class="c3">2</td><td class="c3">77&micro;s</td><td class="s"><div class="calls"><div class="calls_in"># spent 77&micro;s (8+69) within Bio::Phylo::Util::Exceptions::BEGIN@3 which was called:
165# once (8&micro;s+69&micro;s) by Bio::Phylo::Identifiable::BEGIN@3 at <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#3">line 3</a></div></div>use base 'Exporter';<div class="calls"><div class="calls_out"># spent 77&micro;s making 1 call to <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#3">Bio::Phylo::Util::Exceptions::BEGIN@3</a>
166# spent 70&micro;s making 1 call to <a href="base-pm-22-block.html#58">base::import</a>, recursion: max depth 1, sum of overlapping time 70&micro;s</div></div></td></tr>
167<tr><td class="h"><a name="4"></a>4</td><td class="c3">2</td><td class="c1"><span title="Avg 54&micro;s">108&micro;s</span></td><td class="c3">2</td><td class="c0">452&micro;s</td><td class="s"><div class="calls"><div class="calls_in"># spent 449&micro;s (426+23) within Bio::Phylo::Util::Exceptions::BEGIN@4 which was called:
168# once (426&micro;s+23&micro;s) by Bio::Phylo::Identifiable::BEGIN@3 at <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#4">line 4</a></div></div>use Bio::Phylo::Util::StackTrace;<div class="calls"><div class="calls_out"># spent 449&micro;s making 1 call to <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#4">Bio::Phylo::Util::Exceptions::BEGIN@4</a>
169# spent 3&micro;s making 1 call to <a href="UNIVERSAL-pm-738-block.html#16">UNIVERSAL::import</a></div></div></td></tr>
170<tr><td class="h"><a name="5"></a>5</td><td class="c3">2</td><td class="c3"><span title="Avg 31&micro;s">62&micro;s</span></td><td class="c3">2</td><td class="c3">97&micro;s</td><td class="s"><div class="calls"><div class="calls_in"># spent 53&micro;s (10+44) within Bio::Phylo::Util::Exceptions::BEGIN@5 which was called:
171# once (10&micro;s+44&micro;s) by Bio::Phylo::Identifiable::BEGIN@3 at <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#5">line 5</a></div></div>use Scalar::Util 'blessed';<div class="calls"><div class="calls_out"># spent 53&micro;s making 1 call to <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#5">Bio::Phylo::Util::Exceptions::BEGIN@5</a>
172# spent 44&micro;s making 1 call to <a href="Exporter-pm-8-block.html#28">Exporter::import</a></div></div></td></tr>
173<tr><td class="h"><a name="6"></a>6</td><td class="c3">2</td><td class="c0"><span title="Avg 461&micro;s">922&micro;s</span></td><td class="c3">2</td><td class="c3">98&micro;s</td><td class="s"><div class="calls"><div class="calls_in"># spent 57&micro;s (15+42) within Bio::Phylo::Util::Exceptions::BEGIN@6 which was called:
174# once (15&micro;s+42&micro;s) by Bio::Phylo::Identifiable::BEGIN@3 at <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#6">line 6</a></div></div>use overload 'bool' =&gt; sub { 1 }, 'fallback' =&gt; 1, '&quot;&quot;' =&gt; \&amp;as_string;<div class="calls"><div class="calls_out"># spent 57&micro;s making 1 call to <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#6">Bio::Phylo::Util::Exceptions::BEGIN@6</a>
175# spent 42&micro;s making 1 call to <a href="overload-pm-29-block.html#30">overload::import</a></div></div></td></tr>
176<tr><td class="h"><a name="7"></a>7</td><td class="c3">1</td><td class="c3"><span title="Avg 2&micro;s">2&micro;s</span></td><td></td><td></td><td class="s">our ( @EXPORT_OK, $AUTOLOAD ) = qw'throw';</td></tr>
177<tr><td class="h"><a name="8"></a>8</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
178<tr><td class="h"><a name="9"></a>9</td><td></td><td></td><td></td><td></td><td class="s">sub new {</td></tr>
179<tr><td class="h"><a name="10"></a>10</td><td></td><td></td><td></td><td></td><td class="s"> my $class = shift;</td></tr>
180<tr><td class="h"><a name="11"></a>11</td><td></td><td></td><td></td><td></td><td class="s"> my %args = @_;</td></tr>
181<tr><td class="h"><a name="12"></a>12</td><td></td><td></td><td></td><td></td><td class="s"> my $self = {</td></tr>
182<tr><td class="h"><a name="13"></a>13</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
183<tr><td class="h"><a name="14"></a>14</td><td></td><td></td><td></td><td></td><td class="s"> # 'error' =&gt; $args{'error'},</td></tr>
184<tr><td class="h"><a name="15"></a>15</td><td></td><td></td><td></td><td></td><td class="s"> # 'description' =&gt; $args{'description'},</td></tr>
185<tr><td class="h"><a name="16"></a>16</td><td></td><td></td><td></td><td></td><td class="s"> 'trace' =&gt; Bio::Phylo::Util::StackTrace-&gt;new,</td></tr>
186<tr><td class="h"><a name="17"></a>17</td><td></td><td></td><td></td><td></td><td class="s"> 'time' =&gt; CORE::time(),</td></tr>
187<tr><td class="h"><a name="18"></a>18</td><td></td><td></td><td></td><td></td><td class="s"> 'pid' =&gt; $$,</td></tr>
188<tr><td class="h"><a name="19"></a>19</td><td></td><td></td><td></td><td></td><td class="s"> 'uid' =&gt; $&lt;,</td></tr>
189<tr><td class="h"><a name="20"></a>20</td><td></td><td></td><td></td><td></td><td class="s"> 'euid' =&gt; $&gt;,</td></tr>
190<tr><td class="h"><a name="21"></a>21</td><td></td><td></td><td></td><td></td><td class="s"> 'gid' =&gt; $(,</td></tr>
191<tr><td class="h"><a name="22"></a>22</td><td></td><td></td><td></td><td></td><td class="s"> 'egid' =&gt; $),</td></tr>
192<tr><td class="h"><a name="23"></a>23</td><td></td><td></td><td></td><td></td><td class="s"> %args</td></tr>
193<tr><td class="h"><a name="24"></a>24</td><td></td><td></td><td></td><td></td><td class="s"> };</td></tr>
194<tr><td class="h"><a name="25"></a>25</td><td></td><td></td><td></td><td></td><td class="s"> return bless $self, $class;</td></tr>
195<tr><td class="h"><a name="26"></a>26</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
196<tr><td class="h"><a name="27"></a>27</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
197<tr><td class="h"><a name="28"></a>28</td><td></td><td></td><td></td><td></td><td class="s">sub as_string {</td></tr>
198<tr><td class="h"><a name="29"></a>29</td><td></td><td></td><td></td><td></td><td class="s"> my $self = shift;</td></tr>
199<tr><td class="h"><a name="30"></a>30</td><td></td><td></td><td></td><td></td><td class="s"> my $error = $self-&gt;error;</td></tr>
200<tr><td class="h"><a name="31"></a>31</td><td></td><td></td><td></td><td></td><td class="s"> my $description = $self-&gt;description;</td></tr>
201<tr><td class="h"><a name="32"></a>32</td><td></td><td></td><td></td><td></td><td class="s"> my $class = ref $self;</td></tr>
202<tr><td class="h"><a name="33"></a>33</td><td></td><td></td><td></td><td></td><td class="s"> my $trace = join &quot;\n&quot;, map { &quot;STACK: $_&quot; } split '\n',</td></tr>
203<tr><td class="h"><a name="34"></a>34</td><td></td><td></td><td></td><td></td><td class="s"> $self-&gt;trace-&gt;as_string;</td></tr>
204<tr><td class="h"><a name="35"></a>35</td><td></td><td></td><td></td><td></td><td class="s"> return &lt;&lt;&quot;ERROR_HERE_DOC&quot;;</td></tr>
205<tr><td class="h"><a name="36"></a>36</td><td></td><td></td><td></td><td></td><td class="s">-------------------------- EXCEPTION ----------------------------</td></tr>
206<tr><td class="h"><a name="37"></a>37</td><td></td><td></td><td></td><td></td><td class="s">Message: $error</td></tr>
207<tr><td class="h"><a name="38"></a>38</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
208<tr><td class="h"><a name="39"></a>39</td><td></td><td></td><td></td><td></td><td class="s">An exception of type $class</td></tr>
209<tr><td class="h"><a name="40"></a>40</td><td></td><td></td><td></td><td></td><td class="s">was thrown.</td></tr>
210<tr><td class="h"><a name="41"></a>41</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
211<tr><td class="h"><a name="42"></a>42</td><td></td><td></td><td></td><td></td><td class="s">$description</td></tr>
212<tr><td class="h"><a name="43"></a>43</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
213<tr><td class="h"><a name="44"></a>44</td><td></td><td></td><td></td><td></td><td class="s">Refer to the Bio::Phylo::Util::Exceptions documentation for more</td></tr>
214<tr><td class="h"><a name="45"></a>45</td><td></td><td></td><td></td><td></td><td class="s">information.</td></tr>
215<tr><td class="h"><a name="46"></a>46</td><td></td><td></td><td></td><td></td><td class="s">------------------------- STACK TRACE ---------------------------</td></tr>
216<tr><td class="h"><a name="47"></a>47</td><td></td><td></td><td></td><td></td><td class="s">$trace </td></tr>
217<tr><td class="h"><a name="48"></a>48</td><td></td><td></td><td></td><td></td><td class="s">-----------------------------------------------------------------</td></tr>
218<tr><td class="h"><a name="49"></a>49</td><td></td><td></td><td></td><td></td><td class="s">ERROR_HERE_DOC</td></tr>
219<tr><td class="h"><a name="50"></a>50</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
220<tr><td class="h"><a name="51"></a>51</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
221<tr><td class="h"><a name="52"></a>52</td><td></td><td></td><td></td><td></td><td class="s">sub throw (@) {</td></tr>
222<tr><td class="h"><a name="53"></a>53</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
223<tr><td class="h"><a name="54"></a>54</td><td></td><td></td><td></td><td></td><td class="s"> # called as static method, with odd args</td></tr>
224<tr><td class="h"><a name="55"></a>55</td><td></td><td></td><td></td><td></td><td class="s"> my $self;</td></tr>
225<tr><td class="h"><a name="56"></a>56</td><td></td><td></td><td></td><td></td><td class="s"> if ( scalar @_ % 2 ) {</td></tr>
226<tr><td class="h"><a name="57"></a>57</td><td></td><td></td><td></td><td></td><td class="s"> my $class = shift;</td></tr>
227<tr><td class="h"><a name="58"></a>58</td><td></td><td></td><td></td><td></td><td class="s"> $self = $class-&gt;new(@_);</td></tr>
228<tr><td class="h"><a name="59"></a>59</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
229<tr><td class="h"><a name="60"></a>60</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
230<tr><td class="h"><a name="61"></a>61</td><td></td><td></td><td></td><td></td><td class="s"> # called as function, with even args e.g. throw BadArgs =&gt; 'msg';</td></tr>
231<tr><td class="h"><a name="62"></a>62</td><td></td><td></td><td></td><td></td><td class="s"> else {</td></tr>
232<tr><td class="h"><a name="63"></a>63</td><td></td><td></td><td></td><td></td><td class="s"> my $type = shift;</td></tr>
233<tr><td class="h"><a name="64"></a>64</td><td></td><td></td><td></td><td></td><td class="s"> my $class = __PACKAGE__ . '::' . $type;</td></tr>
234<tr><td class="h"><a name="65"></a>65</td><td></td><td></td><td></td><td></td><td class="s"> if ( $class-&gt;isa('Bio::Phylo::Util::Exceptions') ) {</td></tr>
235<tr><td class="h"><a name="66"></a>66</td><td></td><td></td><td></td><td></td><td class="s"> $self = $class-&gt;new( 'error' =&gt; shift, @_ );</td></tr>
236<tr><td class="h"><a name="67"></a>67</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
237<tr><td class="h"><a name="68"></a>68</td><td></td><td></td><td></td><td></td><td class="s"> else {</td></tr>
238<tr><td class="h"><a name="69"></a>69</td><td></td><td></td><td></td><td></td><td class="s"> $self = Bio::Phylo::Util::Exceptions::Generic-&gt;new(</td></tr>
239<tr><td class="h"><a name="70"></a>70</td><td></td><td></td><td></td><td></td><td class="s"> 'error' =&gt; shift,</td></tr>
240<tr><td class="h"><a name="71"></a>71</td><td></td><td></td><td></td><td></td><td class="s"> @_</td></tr>
241<tr><td class="h"><a name="72"></a>72</td><td></td><td></td><td></td><td></td><td class="s"> );</td></tr>
242<tr><td class="h"><a name="73"></a>73</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
243<tr><td class="h"><a name="74"></a>74</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
244<tr><td class="h"><a name="75"></a>75</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
245<tr><td class="h"><a name="76"></a>76</td><td></td><td></td><td></td><td></td><td class="s"> # if ( not $ENV{'PERL_DL_NONLAZY'} ) {</td></tr>
246<tr><td class="h"><a name="77"></a>77</td><td></td><td></td><td></td><td></td><td class="s"> # require Bio::Phylo;</td></tr>
247<tr><td class="h"><a name="78"></a>78</td><td></td><td></td><td></td><td></td><td class="s"> # $Bio::Phylo::Util::Logger::TRACEBACK = 1;</td></tr>
248<tr><td class="h"><a name="79"></a>79</td><td></td><td></td><td></td><td></td><td class="s"> # my $logger = Bio::Phylo-&gt;get_logger();</td></tr>
249<tr><td class="h"><a name="80"></a>80</td><td></td><td></td><td></td><td></td><td class="s"> # $logger-&gt;error($self-&gt;error);</td></tr>
250<tr><td class="h"><a name="81"></a>81</td><td></td><td></td><td></td><td></td><td class="s"> # $Bio::Phylo::Util::Logger::TRACEBACK = 0;</td></tr>
251<tr><td class="h"><a name="82"></a>82</td><td></td><td></td><td></td><td></td><td class="s"> # }</td></tr>
252<tr><td class="h"><a name="83"></a>83</td><td></td><td></td><td></td><td></td><td class="s"> die $self;</td></tr>
253<tr><td class="h"><a name="84"></a>84</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
254<tr><td class="h"><a name="85"></a>85</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
255<tr><td class="h"><a name="86"></a>86</td><td></td><td></td><td></td><td></td><td class="s">sub rethrow {</td></tr>
256<tr><td class="h"><a name="87"></a>87</td><td></td><td></td><td></td><td></td><td class="s"> my $self = shift;</td></tr>
257<tr><td class="h"><a name="88"></a>88</td><td></td><td></td><td></td><td></td><td class="s"> die $self;</td></tr>
258<tr><td class="h"><a name="89"></a>89</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
259<tr><td class="h"><a name="90"></a>90</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
260<tr><td class="h"><a name="91"></a>91</td><td></td><td></td><td></td><td></td><td class="s">sub caught {</td></tr>
261<tr><td class="h"><a name="92"></a>92</td><td></td><td></td><td></td><td></td><td class="s"> my $class = shift;</td></tr>
262<tr><td class="h"><a name="93"></a>93</td><td></td><td></td><td></td><td></td><td class="s"> if (@_) {</td></tr>
263<tr><td class="h"><a name="94"></a>94</td><td></td><td></td><td></td><td></td><td class="s"> $class = shift;</td></tr>
264<tr><td class="h"><a name="95"></a>95</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
265<tr><td class="h"><a name="96"></a>96</td><td></td><td></td><td></td><td></td><td class="s"> if ($@) {</td></tr>
266<tr><td class="h"><a name="97"></a>97</td><td></td><td></td><td></td><td></td><td class="s"> if ( blessed $@ and $@-&gt;isa($class) ) {</td></tr>
267<tr><td class="h"><a name="98"></a>98</td><td></td><td></td><td></td><td></td><td class="s"> return $@;</td></tr>
268<tr><td class="h"><a name="99"></a>99</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
269<tr><td class="h"><a name="100"></a>100</td><td></td><td></td><td></td><td></td><td class="s"> else {</td></tr>
270<tr><td class="h"><a name="101"></a>101</td><td></td><td></td><td></td><td></td><td class="s"> die $@;</td></tr>
271<tr><td class="h"><a name="102"></a>102</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
272<tr><td class="h"><a name="103"></a>103</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
273<tr><td class="h"><a name="104"></a>104</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
274<tr><td class="h"><a name="105"></a>105</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
275<tr><td class="h"><a name="106"></a>106</td><td></td><td></td><td></td><td></td><td class="s">sub AUTOLOAD {</td></tr>
276<tr><td class="h"><a name="107"></a>107</td><td></td><td></td><td></td><td></td><td class="s"> my $self = shift;</td></tr>
277<tr><td class="h"><a name="108"></a>108</td><td></td><td></td><td></td><td></td><td class="s"> my $field = $AUTOLOAD;</td></tr>
278<tr><td class="h"><a name="109"></a>109</td><td></td><td></td><td></td><td></td><td class="s"> $field =~ s/.*://;</td></tr>
279<tr><td class="h"><a name="110"></a>110</td><td></td><td></td><td></td><td></td><td class="s"> return $self-&gt;{$field};</td></tr>
280<tr><td class="h"><a name="111"></a>111</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
281<tr><td class="h"><a name="112"></a>112</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
282<tr><td class="h"><a name="113"></a>113</td><td></td><td></td><td></td><td></td><td class="s"><div class="calls"><div class="calls_in"># spent 3.96ms (3.06+899&micro;s) within Bio::Phylo::Util::Exceptions::_make_exceptions which was called:
283# once (3.06ms+899&micro;s) by Bio::Phylo::Identifiable::BEGIN@3 at <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#139">line 139</a></div></div>sub _make_exceptions {</td></tr>
284<tr><td class="h"><a name="114"></a>114</td><td class="c0">4</td><td class="c3"><span title="Avg 7&micro;s">28&micro;s</span></td><td></td><td></td><td class="s"> my $class = shift;</td></tr>
285<tr><td class="h"><a name="115"></a>115</td><td></td><td></td><td></td><td></td><td class="s"> my $root = shift;</td></tr>
286<tr><td class="h"><a name="116"></a>116</td><td></td><td></td><td></td><td></td><td class="s"> my %exceptions = @_;</td></tr>
287<tr><td class="h"><a name="117"></a>117</td><td></td><td></td><td></td><td></td><td class="s"> for my $exception ( keys %exceptions ) {</td></tr>
288<tr><td class="h"><a name="118"></a>118</td><td class="c0">102</td><td class="c0"><span title="Avg 12&micro;s">1.26ms</span></td><td></td><td></td><td class="s"> my $isa = $exceptions{$exception}-&gt;{'isa'};</td></tr>
289<tr><td class="h"><a name="119"></a>119</td><td></td><td></td><td></td><td></td><td class="s"> my @isa = ref $isa ? @$isa : ($isa);</td></tr>
290<tr><td class="h"><a name="120"></a>120</td><td></td><td></td><td></td><td></td><td class="s"> my $description = $exceptions{$exception}-&gt;{'description'};</td></tr>
291<tr><td class="h"><a name="121"></a>121</td><td></td><td></td><td></td><td></td><td class="s"> my $class = &lt;&lt;&quot;EXCEPTION_CLASS&quot;;</td></tr>
292<tr><td class="h"><a name="122"></a>122</td><td></td><td></td><td></td><td></td><td class="s">package ${exception};</td></tr>
293<tr><td class="h"><a name="123"></a>123</td><td></td><td></td><td></td><td></td><td class="s">use vars '\@ISA';</td></tr>
294<tr><td class="h"><a name="124"></a>124</td><td></td><td></td><td></td><td></td><td class="s">\@ISA=qw(@isa);</td></tr>
295<tr><td class="h"><a name="125"></a>125</td><td></td><td></td><td></td><td></td><td class="s">my \$desc;</td></tr>
296<tr><td class="h"><a name="126"></a>126</td><td></td><td></td><td></td><td></td><td class="s">sub description { </td></tr>
297<tr><td class="h"><a name="127"></a>127</td><td></td><td></td><td></td><td></td><td class="s"> my \$self = shift;</td></tr>
298<tr><td class="h"><a name="128"></a>128</td><td></td><td></td><td></td><td></td><td class="s"> if ( \@_ ) {</td></tr>
299<tr><td class="h"><a name="129"></a>129</td><td></td><td></td><td></td><td></td><td class="s"> \$desc = shift;</td></tr>
300<tr><td class="h"><a name="130"></a>130</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
301<tr><td class="h"><a name="131"></a>131</td><td></td><td></td><td></td><td></td><td class="s"> return \$desc;</td></tr>
302<tr><td class="h"><a name="132"></a>132</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
303<tr><td class="h"><a name="133"></a>133</td><td></td><td></td><td></td><td></td><td class="s">1;</td></tr>
304<tr><td class="h"><a name="134"></a>134</td><td></td><td></td><td></td><td></td><td class="s">EXCEPTION_CLASS</td></tr>
305<tr><td class="h"><a name="135"></a>135</td><td></td><td></td><td></td><td></td><td class="s"> eval $class;<div class="calls"><div class="calls_out"> # spent 183&micro;s executing statements in <a href="(eval 746)[Bio-Phylo-Util-Exceptions-pm-135]-1157-line.html">string eval</a><br /> # includes 21&micro;s spent executing 2 calls to 2 subs defined therein.
306 # spent 150&micro;s executing statements in <a href="(eval 749)[Bio-Phylo-Util-Exceptions-pm-135]-1160-line.html">string eval</a><br /> # includes 18&micro;s spent executing 2 calls to 2 subs defined therein.
307 # spent 149&micro;s executing statements in <a href="(eval 744)[Bio-Phylo-Util-Exceptions-pm-135]-1155-line.html">string eval</a><br /> # includes 20&micro;s spent executing 2 calls to 2 subs defined therein.
308 # spent 146&micro;s executing statements in <a href="(eval 739)[Bio-Phylo-Util-Exceptions-pm-135]-1150-line.html">string eval</a><br /> # includes 21&micro;s spent executing 2 calls to 2 subs defined therein.
309 # spent 145&micro;s executing statements in <a href="(eval 742)[Bio-Phylo-Util-Exceptions-pm-135]-1153-line.html">string eval</a><br /> # includes 20&micro;s spent executing 2 calls to 2 subs defined therein.
310 # spent 125&micro;s executing statements in <a href="(eval 734)[Bio-Phylo-Util-Exceptions-pm-135]-1145-line.html">string eval</a><br /> # includes 25&micro;s spent executing 2 calls to 2 subs defined therein.
311 # spent 125&micro;s executing statements in <a href="(eval 750)[Bio-Phylo-Util-Exceptions-pm-135]-1161-line.html">string eval</a><br /> # includes 18&micro;s spent executing 2 calls to 2 subs defined therein.
312 # spent 121&micro;s executing statements in <a href="(eval 741)[Bio-Phylo-Util-Exceptions-pm-135]-1152-line.html">string eval</a><br /> # includes 21&micro;s spent executing 2 calls to 2 subs defined therein.
313 # spent 112&micro;s executing statements in <a href="(eval 736)[Bio-Phylo-Util-Exceptions-pm-135]-1147-line.html">string eval</a><br /> # includes 22&micro;s spent executing 2 calls to 2 subs defined therein.
314 # spent 112&micro;s executing statements in <a href="(eval 735)[Bio-Phylo-Util-Exceptions-pm-135]-1146-line.html">string eval</a><br /> # includes 23&micro;s spent executing 2 calls to 2 subs defined therein.
315 # spent 111&micro;s executing statements in <a href="(eval 738)[Bio-Phylo-Util-Exceptions-pm-135]-1149-line.html">string eval</a><br /> # includes 21&micro;s spent executing 2 calls to 2 subs defined therein.
316 # spent 107&micro;s executing statements in <a href="(eval 743)[Bio-Phylo-Util-Exceptions-pm-135]-1154-line.html">string eval</a><br /> # includes 19&micro;s spent executing 2 calls to 2 subs defined therein.
317 # spent 106&micro;s executing statements in <a href="(eval 740)[Bio-Phylo-Util-Exceptions-pm-135]-1151-line.html">string eval</a><br /> # includes 21&micro;s spent executing 2 calls to 2 subs defined therein.
318 # spent 104&micro;s executing statements in <a href="(eval 745)[Bio-Phylo-Util-Exceptions-pm-135]-1156-line.html">string eval</a><br /> # includes 20&micro;s spent executing 2 calls to 2 subs defined therein.
319 # spent 103&micro;s executing statements in <a href="(eval 737)[Bio-Phylo-Util-Exceptions-pm-135]-1148-line.html">string eval</a><br /> # includes 21&micro;s spent executing 2 calls to 2 subs defined therein.
320 # spent 67&micro;s executing statements in <a href="(eval 747)[Bio-Phylo-Util-Exceptions-pm-135]-1158-line.html">string eval</a><br /> # includes 14&micro;s spent executing 2 calls to 2 subs defined therein.
321 # spent 66&micro;s executing statements in <a href="(eval 748)[Bio-Phylo-Util-Exceptions-pm-135]-1159-line.html">string eval</a><br /> # includes 13&micro;s spent executing 2 calls to 2 subs defined therein.</div></div></td></tr>
322<tr><td class="h"><a name="136"></a>136</td><td></td><td></td><td class="c0">17</td><td class="c3">75&micro;s</td><td class="s"> $exception-&gt;description($description);<div class="calls"><div class="calls_out"> # spent 5&micro;s making 1 call to <a href="(eval 735)[Bio-Phylo-Util-Exceptions-pm-135]-1146-line.html#5">Bio::Phylo::Util::Exceptions::BadString::description</a>
323 # spent 5&micro;s making 1 call to <a href="(eval 744)[Bio-Phylo-Util-Exceptions-pm-135]-1155-line.html#5">Bio::Phylo::Util::Exceptions::BadArgs::description</a>
324 # spent 5&micro;s making 1 call to <a href="(eval 734)[Bio-Phylo-Util-Exceptions-pm-135]-1145-line.html#5">Bio::Phylo::Util::Exceptions::BadFormat::description</a>
325 # spent 5&micro;s making 1 call to <a href="(eval 741)[Bio-Phylo-Util-Exceptions-pm-135]-1152-line.html#5">Bio::Phylo::Util::Exceptions::InvalidData::description</a>
326 # spent 5&micro;s making 1 call to <a href="(eval 736)[Bio-Phylo-Util-Exceptions-pm-135]-1147-line.html#5">Bio::Phylo::Util::Exceptions::BadNumber::description</a>
327 # spent 5&micro;s making 1 call to <a href="(eval 739)[Bio-Phylo-Util-Exceptions-pm-135]-1150-line.html#5">Bio::Phylo::Util::Exceptions::NetworkError::description</a>
328 # spent 5&micro;s making 1 call to <a href="(eval 738)[Bio-Phylo-Util-Exceptions-pm-135]-1149-line.html#5">Bio::Phylo::Util::Exceptions::UnknownMethod::description</a>
329 # spent 5&micro;s making 1 call to <a href="(eval 742)[Bio-Phylo-Util-Exceptions-pm-135]-1153-line.html#5">Bio::Phylo::Util::Exceptions::ExtensionError::description</a>
330 # spent 5&micro;s making 1 call to <a href="(eval 740)[Bio-Phylo-Util-Exceptions-pm-135]-1151-line.html#5">Bio::Phylo::Util::Exceptions::FileError::description</a>
331 # spent 5&micro;s making 1 call to <a href="(eval 737)[Bio-Phylo-Util-Exceptions-pm-135]-1148-line.html#5">Bio::Phylo::Util::Exceptions::ObjectMismatch::description</a>
332 # spent 4&micro;s making 1 call to <a href="(eval 745)[Bio-Phylo-Util-Exceptions-pm-135]-1156-line.html#5">Bio::Phylo::Util::Exceptions::OddHash::description</a>
333 # spent 4&micro;s making 1 call to <a href="(eval 743)[Bio-Phylo-Util-Exceptions-pm-135]-1154-line.html#5">Bio::Phylo::Util::Exceptions::NotImplemented::description</a>
334 # spent 4&micro;s making 1 call to <a href="(eval 749)[Bio-Phylo-Util-Exceptions-pm-135]-1160-line.html#5">Bio::Phylo::Util::Exceptions::System::description</a>
335 # spent 4&micro;s making 1 call to <a href="(eval 748)[Bio-Phylo-Util-Exceptions-pm-135]-1159-line.html#5">Bio::Phylo::Util::Exceptions::OutOfBounds::description</a>
336 # spent 4&micro;s making 1 call to <a href="(eval 750)[Bio-Phylo-Util-Exceptions-pm-135]-1161-line.html#5">Bio::Phylo::Util::Exceptions::API::description</a>
337 # spent 3&micro;s making 1 call to <a href="(eval 746)[Bio-Phylo-Util-Exceptions-pm-135]-1157-line.html#5">Bio::Phylo::Util::Exceptions::Generic::description</a>
338 # spent 3&micro;s making 1 call to <a href="(eval 747)[Bio-Phylo-Util-Exceptions-pm-135]-1158-line.html#5">Bio::Phylo::Util::Exceptions::Deprecated::description</a></div></div></td></tr>
339<tr><td class="h"><a name="137"></a>137</td><td></td><td></td><td></td><td></td><td class="s"> }</td></tr>
340<tr><td class="h"><a name="138"></a>138</td><td></td><td></td><td></td><td></td><td class="s">}</td></tr>
341<tr><td class="h"><a name="139"></a>139</td><td class="c3">1</td><td class="c3"><span title="Avg 47&micro;s">47&micro;s</span></td><td class="c3">1</td><td class="c0">3.96ms</td><td class="s">__PACKAGE__-&gt;_make_exceptions(<div class="calls"><div class="calls_out"># spent 3.96ms making 1 call to <a href="Bio-Phylo-Util-Exceptions-pm-1142-block.html#113">Bio::Phylo::Util::Exceptions::_make_exceptions</a></div></div></td></tr>
342<tr><td class="h"><a name="140"></a>140</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
343<tr><td class="h"><a name="141"></a>141</td><td></td><td></td><td></td><td></td><td class="s"> # root classes</td></tr>
344<tr><td class="h"><a name="142"></a>142</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions',</td></tr>
345<tr><td class="h"><a name="143"></a>143</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::Generic' =&gt; {</td></tr>
346<tr><td class="h"><a name="144"></a>144</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions',</td></tr>
347<tr><td class="h"><a name="145"></a>145</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
348<tr><td class="h"><a name="146"></a>146</td><td></td><td></td><td></td><td></td><td class="s"> &quot;No further details about this type of error are available.&quot;</td></tr>
349<tr><td class="h"><a name="147"></a>147</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
350<tr><td class="h"><a name="148"></a>148</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
351<tr><td class="h"><a name="149"></a>149</td><td></td><td></td><td></td><td></td><td class="s"> # exceptions on method calls</td></tr>
352<tr><td class="h"><a name="150"></a>150</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::API' =&gt; {</td></tr>
353<tr><td class="h"><a name="151"></a>151</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::Generic',</td></tr>
354<tr><td class="h"><a name="152"></a>152</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
355<tr><td class="h"><a name="153"></a>153</td><td></td><td></td><td></td><td></td><td class="s"> &quot;No more details about this type of error are available.&quot;</td></tr>
356<tr><td class="h"><a name="154"></a>154</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
357<tr><td class="h"><a name="155"></a>155</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::UnknownMethod' =&gt; {</td></tr>
358<tr><td class="h"><a name="156"></a>156</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::API',</td></tr>
359<tr><td class="h"><a name="157"></a>157</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
360<tr><td class="h"><a name="158"></a>158</td><td></td><td></td><td></td><td></td><td class="s"> &quot;This kind of error happens when a non-existent method is called.&quot;,</td></tr>
361<tr><td class="h"><a name="159"></a>159</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
362<tr><td class="h"><a name="160"></a>160</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::NotImplemented' =&gt; {</td></tr>
363<tr><td class="h"><a name="161"></a>161</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::API',</td></tr>
364<tr><td class="h"><a name="162"></a>162</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
365<tr><td class="h"><a name="163"></a>163</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when a non-implemented\n(interface) method is called.&quot;,</td></tr>
366<tr><td class="h"><a name="164"></a>164</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
367<tr><td class="h"><a name="165"></a>165</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::Deprecated' =&gt; {</td></tr>
368<tr><td class="h"><a name="166"></a>166</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::API',</td></tr>
369<tr><td class="h"><a name="167"></a>167</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
370<tr><td class="h"><a name="168"></a>168</td><td></td><td></td><td></td><td></td><td class="s"> &quot;This kind of error happens when a deprecated method is called.&quot;,</td></tr>
371<tr><td class="h"><a name="169"></a>169</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
372<tr><td class="h"><a name="170"></a>170</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
373<tr><td class="h"><a name="171"></a>171</td><td></td><td></td><td></td><td></td><td class="s"> # exceptions on arguments</td></tr>
374<tr><td class="h"><a name="172"></a>172</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::BadArgs' =&gt; {</td></tr>
375<tr><td class="h"><a name="173"></a>173</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::Generic',</td></tr>
376<tr><td class="h"><a name="174"></a>174</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
377<tr><td class="h"><a name="175"></a>175</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when bad or incomplete arguments\nare provided.&quot;,</td></tr>
378<tr><td class="h"><a name="176"></a>176</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
379<tr><td class="h"><a name="177"></a>177</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::BadString' =&gt; {</td></tr>
380<tr><td class="h"><a name="178"></a>178</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::BadArgs',</td></tr>
381<tr><td class="h"><a name="179"></a>179</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
382<tr><td class="h"><a name="180"></a>180</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when an unsafe string argument is\nprovided.&quot;,</td></tr>
383<tr><td class="h"><a name="181"></a>181</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
384<tr><td class="h"><a name="182"></a>182</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::OddHash' =&gt; {</td></tr>
385<tr><td class="h"><a name="183"></a>183</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::BadArgs',</td></tr>
386<tr><td class="h"><a name="184"></a>184</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
387<tr><td class="h"><a name="185"></a>185</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when an uneven number\nof arguments (so no key/value pairs) was provided.&quot;,</td></tr>
388<tr><td class="h"><a name="186"></a>186</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
389<tr><td class="h"><a name="187"></a>187</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::ObjectMismatch' =&gt; {</td></tr>
390<tr><td class="h"><a name="188"></a>188</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::BadArgs',</td></tr>
391<tr><td class="h"><a name="189"></a>189</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
392<tr><td class="h"><a name="190"></a>190</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when an invalid object\nargument is provided.&quot;,</td></tr>
393<tr><td class="h"><a name="191"></a>191</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
394<tr><td class="h"><a name="192"></a>192</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::InvalidData' =&gt; {</td></tr>
395<tr><td class="h"><a name="193"></a>193</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; [</td></tr>
396<tr><td class="h"><a name="194"></a>194</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::BadString',</td></tr>
397<tr><td class="h"><a name="195"></a>195</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::BadFormat',</td></tr>
398<tr><td class="h"><a name="196"></a>196</td><td></td><td></td><td></td><td></td><td class="s"> ],</td></tr>
399<tr><td class="h"><a name="197"></a>197</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
400<tr><td class="h"><a name="198"></a>198</td><td></td><td></td><td></td><td></td><td class="s"> &quot;This kind of error happens when invalid character data is\nprovided.&quot;</td></tr>
401<tr><td class="h"><a name="199"></a>199</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
402<tr><td class="h"><a name="200"></a>200</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::OutOfBounds' =&gt; {</td></tr>
403<tr><td class="h"><a name="201"></a>201</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::BadArgs',</td></tr>
404<tr><td class="h"><a name="202"></a>202</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
405<tr><td class="h"><a name="203"></a>203</td><td></td><td></td><td></td><td></td><td class="s"> &quot;This kind of error happens when an index is outside of its range.&quot;,</td></tr>
406<tr><td class="h"><a name="204"></a>204</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
407<tr><td class="h"><a name="205"></a>205</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::BadNumber' =&gt; {</td></tr>
408<tr><td class="h"><a name="206"></a>206</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::Generic',</td></tr>
409<tr><td class="h"><a name="207"></a>207</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
410<tr><td class="h"><a name="208"></a>208</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when an invalid numerical argument\nis provided.&quot;,</td></tr>
411<tr><td class="h"><a name="209"></a>209</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
412<tr><td class="h"><a name="210"></a>210</td><td></td><td></td><td></td><td></td><td class="s"></td></tr>
413<tr><td class="h"><a name="211"></a>211</td><td></td><td></td><td></td><td></td><td class="s"> # system exceptions</td></tr>
414<tr><td class="h"><a name="212"></a>212</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::System' =&gt; {</td></tr>
415<tr><td class="h"><a name="213"></a>213</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::Generic',</td></tr>
416<tr><td class="h"><a name="214"></a>214</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
417<tr><td class="h"><a name="215"></a>215</td><td></td><td></td><td></td><td></td><td class="s"> &quot;This kind of error happens when there is a system misconfiguration.&quot;,</td></tr>
418<tr><td class="h"><a name="216"></a>216</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
419<tr><td class="h"><a name="217"></a>217</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::FileError' =&gt; {</td></tr>
420<tr><td class="h"><a name="218"></a>218</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::System',</td></tr>
421<tr><td class="h"><a name="219"></a>219</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
422<tr><td class="h"><a name="220"></a>220</td><td></td><td></td><td></td><td></td><td class="s"> &quot;This kind of error happens when a file can not be accessed.&quot;,</td></tr>
423<tr><td class="h"><a name="221"></a>221</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
424<tr><td class="h"><a name="222"></a>222</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::NetworkError' =&gt; {</td></tr>
425<tr><td class="h"><a name="223"></a>223</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::System',</td></tr>
426<tr><td class="h"><a name="224"></a>224</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
427<tr><td class="h"><a name="225"></a>225</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when a network resource can not be accessed.&quot;,</td></tr>
428<tr><td class="h"><a name="226"></a>226</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
429<tr><td class="h"><a name="227"></a>227</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::ExtensionError' =&gt; {</td></tr>
430<tr><td class="h"><a name="228"></a>228</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; [</td></tr>
431<tr><td class="h"><a name="229"></a>229</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::System',</td></tr>
432<tr><td class="h"><a name="230"></a>230</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::BadFormat',</td></tr>
433<tr><td class="h"><a name="231"></a>231</td><td></td><td></td><td></td><td></td><td class="s"> ],</td></tr>
434<tr><td class="h"><a name="232"></a>232</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
435<tr><td class="h"><a name="233"></a>233</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when an extension module can not be\nloaded.&quot;,</td></tr>
436<tr><td class="h"><a name="234"></a>234</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
437<tr><td class="h"><a name="235"></a>235</td><td></td><td></td><td></td><td></td><td class="s"> 'Bio::Phylo::Util::Exceptions::BadFormat' =&gt; {</td></tr>
438<tr><td class="h"><a name="236"></a>236</td><td></td><td></td><td></td><td></td><td class="s"> 'isa' =&gt; 'Bio::Phylo::Util::Exceptions::System',</td></tr>
439<tr><td class="h"><a name="237"></a>237</td><td></td><td></td><td></td><td></td><td class="s"> 'description' =&gt;</td></tr>
440<tr><td class="h"><a name="238"></a>238</td><td></td><td></td><td></td><td></td><td class="s">&quot;This kind of error happens when a bad\nparse or unparse format was specified.&quot;,</td></tr>
441<tr><td class="h"><a name="239"></a>239</td><td></td><td></td><td></td><td></td><td class="s"> },</td></tr>
442<tr><td class="h"><a name="240"></a>240</td><td></td><td></td><td></td><td></td><td class="s">);</td></tr>
443<tr><td class="h"><a name="241"></a>241</td><td class="c3">1</td><td class="c3"><span title="Avg 53&micro;s">53&micro;s</span></td><td></td><td></td><td class="s">1;</td></tr>
444<tr><td class="h"><a name="242"></a>242</td><td></td><td></td><td></td><td></td><td class="s">__END__</td></tr>
445</tbody></table></div>
446
447 <script type="text/javascript"> $(document).ready(function() {
448
449 $("#subs_table").tablesorter({
450 sortList: [[3,1]],
451 headers: {
452 3: { sorter: 'fmt_time' },
453 4: { sorter: 'fmt_time' }
454 }
455 });
456
457 } ); </script>
458
459 <div class="footer">Report produced by the
460 <a href="http://search.cpan.org/dist/Devel-NYTProf/">NYTProf 4.06</a>
461 Perl profiler, developed by
462 <a href="http://www.linkedin.com/in/timbunce">Tim Bunce</a> and
463 <a href="http://code.nytimes.com">Adam Kaplan</a>.
464 </div>
465 <br /><br /><br /><br /><br /><br /><br /><br /><br /><br />
466 </body></html>
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