Commit | Line | Data |
e58153d6 |
1 | package Text::Tradition::Parser::BaseText; |
b49c4318 |
2 | |
3 | use strict; |
4 | use warnings; |
52ce987f |
5 | use Module::Load; |
b49c4318 |
6 | |
2ceca8c3 |
7 | =head1 NAME |
8 | |
9 | Text::Tradition::Parser::BaseText |
10 | |
11 | =head1 SYNOPSIS |
12 | |
13 | use Text::Tradition::Parser::BaseText qw( merge_base ); |
14 | merge_base( $graph, 'reference.txt', @apparatus_entries ) |
15 | |
16 | =head1 DESCRIPTION |
17 | |
18 | For an overview of the package, see the documentation for the |
19 | Text::Tradition::Graph module. |
20 | |
21 | This module is meant for use with certain of the other Parser classes |
22 | - whenever a list of variants is given with reference to a base text, |
23 | these must be joined into a single collation. The parser should |
24 | therefore make a list of variants and their locations, and BaseText |
25 | will join those listed variants onto the reference text. |
26 | |
27 | =head1 SUBROUTINES |
28 | |
29 | =over |
30 | |
52ce987f |
31 | =item B<parse> |
32 | |
33 | parse( $graph, %opts ); |
34 | |
35 | Takes an initialized graph and a set of options, which must include: |
36 | - 'base' - the base text referenced by the variants |
37 | - 'format' - the format of the variant list |
38 | - 'data' - the variants, in the given format. |
39 | |
40 | =cut |
41 | |
42 | sub parse { |
43 | my( $graph, %opts ) = @_; |
44 | |
45 | my $format_mod = 'Text::Tradition::Parser::' . $opts{'format'}; |
46 | load( $format_mod ); |
47 | my @apparatus_entries = $format_mod->can('read')->( $opts{'data'} ); |
48 | merge_base( $graph, $opts{'base'}, @apparatus_entries ); |
49 | } |
50 | |
2ceca8c3 |
51 | =item B<merge_base> |
52 | |
53 | merge_base( $graph, 'reference.txt', @apparatus_entries ) |
54 | |
55 | Takes three arguments: a newly-initialized Text::Tradition::Graph |
56 | object, a text file containing the reference text, and a list of |
57 | variants (apparatus entries). Adds the base text to the graph, and |
58 | joins the variants to that. |
59 | |
60 | The list of variants is an array of hash references; each hash takes |
61 | the form |
62 | { '_id' => line reference, |
63 | 'rdg_0' => lemma reading, |
64 | 'rdg_1' => first variant, |
65 | ... # and so on until all distinct readings are listed |
66 | 'WitnessA' => 'rdg_0', |
67 | 'WitnessB' => 'rdg_1', |
68 | ... # and so on until all witnesses are listed with their readings |
69 | } |
70 | |
71 | Any hash key that is not of the form /^rdg_\d+$/ and that does not |
72 | begin with an underscore is assumed to be a witness name. Any 'meta' |
73 | information to be passed must be passed in a key with a leading |
74 | underscore in its name. |
75 | |
76 | =cut |
77 | |
b49c4318 |
78 | sub merge_base { |
79 | my( $graph, $base_file, @app_entries ) = @_; |
80 | my @base_line_starts = read_base( $base_file, $graph ); |
81 | |
52ce987f |
82 | my %all_witnesses; |
b49c4318 |
83 | foreach my $app ( @app_entries ) { |
84 | my( $line, $num ) = split( /\./, $app->{_id} ); |
85 | # DEBUG with a short graph |
86 | # last if $line > 2; |
2ceca8c3 |
87 | # DEBUG for problematic entries |
e49731d7 |
88 | my $scrutinize = ""; |
b49c4318 |
89 | my $first_line_node = $base_line_starts[ $line ]; |
90 | my $too_far = $base_line_starts[ $line+1 ]; |
91 | |
92 | my $lemma = $app->{rdg_0}; |
93 | my $seq = 1; |
94 | # Is this the Nth occurrence of this reading in the line? |
95 | if( $lemma =~ s/(_)?(\d)$// ) { |
96 | $seq = $2; |
97 | } |
98 | my @lemma_words = split( /\s+/, $lemma ); |
99 | |
100 | # Now search for the lemma words within this line. |
101 | my $lemma_start = $first_line_node; |
102 | my $lemma_end; |
103 | my %seen; |
104 | while( $lemma_start ne $too_far ) { |
105 | # Loop detection |
106 | if( $seen{ $lemma_start->name() } ) { |
107 | warn "Detected loop at " . $lemma_start->name() . |
108 | ", ref $line,$num"; |
109 | last; |
110 | } |
111 | $seen{ $lemma_start->name() } = 1; |
112 | |
113 | # Try to match the lemma. |
114 | my $unmatch = 0; |
115 | print STDERR "Matching " . cmp_str( $lemma_start) . " against " . |
116 | $lemma_words[0] . "...\n" |
117 | if "$line.$num" eq $scrutinize; |
118 | if( cmp_str( $lemma_start ) eq $lemma_words[0] ) { |
119 | # Skip it if we need a match that is not the first. |
120 | if( --$seq < 1 ) { |
121 | # Now we have to compare the rest of the words here. |
122 | if( scalar( @lemma_words ) > 1 ) { |
123 | my $next_node = $graph->next_word( $lemma_start ); |
124 | foreach my $w ( @lemma_words[1..$#lemma_words] ) { |
125 | printf STDERR "Now matching %s against %s\n", |
126 | cmp_str($next_node), $w |
127 | if "$line.$num" eq $scrutinize; |
128 | if( $w ne cmp_str($next_node) ) { |
129 | $unmatch = 1; |
130 | last; |
131 | } else { |
132 | $lemma_end = $next_node; |
133 | $next_node = $graph->next_word( $lemma_end ); |
134 | } |
135 | } |
136 | } else { |
137 | $lemma_end = $lemma_start; |
138 | } |
139 | } else { |
140 | $unmatch = 1; |
141 | } |
142 | } |
143 | last unless ( $unmatch || !defined( $lemma_end ) ); |
144 | $lemma_end = undef; |
145 | $lemma_start = $graph->next_word( $lemma_start ); |
146 | } |
147 | |
148 | unless( $lemma_end ) { |
149 | warn "No match found for @lemma_words at $line.$num"; |
150 | next; |
151 | } else { |
152 | # These are no longer common nodes; unmark them as such. |
153 | my @lemma_nodes = $graph->node_sequence( $lemma_start, |
154 | $lemma_end ); |
155 | map { $_->set_attribute( 'class', 'lemma' ) } @lemma_nodes; |
156 | } |
157 | |
158 | # Now we have our lemma nodes; we add the variant nodes to the graph. |
159 | |
e49731d7 |
160 | # Keep track of the start and end point of each reading for later |
161 | # node collapse. |
162 | my @readings = ( $lemma_start, $lemma_end ); |
163 | |
b49c4318 |
164 | # For each reading that is not rdg_0, we make a chain of nodes |
165 | # and connect them to the anchor. Edges are named after the mss |
166 | # that are relevant. |
167 | foreach my $k ( grep { /^rdg/ } keys( %$app ) ) { |
168 | next if $k eq 'rdg_0'; # that's the lemma. |
169 | my @variant = split( /\s+/, $app->{$k} ); |
170 | @variant = () if $app->{$k} eq '/'; # This is an omission. |
171 | my @mss = grep { $app->{$_} eq $k } keys( %$app ); |
172 | |
173 | unless( @mss ) { |
174 | print STDERR "Skipping '@variant' at $line.$num: no mss\n"; |
175 | next; |
176 | } |
177 | |
178 | # Determine the label name for the edges here. |
179 | my $edge_name = join(', ', @mss ); |
52ce987f |
180 | @all_witnesses{ @mss } = ( 1 ) x scalar( @mss ); |
b49c4318 |
181 | |
182 | # Make the variant into a set of nodes. |
183 | my $ctr = 0; |
184 | my $last_node = $graph->prior_word( $lemma_start ); |
185 | my $var_start; |
186 | foreach my $vw ( @variant ) { |
187 | my $vwname = "$k/$line.$num.$ctr"; $ctr++; |
188 | my $vwnode = $graph->add_node( $vwname ); |
189 | $vwnode->set_attribute( 'label', $vw ); |
190 | $vwnode->set_attribute( 'class', 'variant' ); |
191 | $graph->add_edge( $last_node, $vwnode, $edge_name ); |
192 | $var_start = $vwnode unless $var_start; |
193 | $last_node = $vwnode; |
194 | } |
195 | # Now hook it up at the end. |
196 | $graph->add_edge( $last_node, $graph->next_word( $lemma_end ), |
197 | $edge_name ); |
198 | |
e49731d7 |
199 | if( $var_start ) { # if it wasn't an empty reading |
200 | push( @readings, $var_start, $last_node ); |
201 | } |
b49c4318 |
202 | } |
e49731d7 |
203 | |
204 | # Now collate and collapse the identical nodes within the graph. |
205 | collate_variants( $graph, @readings ); |
b49c4318 |
206 | } |
207 | |
208 | ## Now in theory I have a graph. I want to make it a little easier to |
209 | ## read. So I collapse nodes that have only one edge in and one edge |
210 | ## out, and I do this by looking at the edges. |
211 | |
52ce987f |
212 | # foreach my $edge ( $graph->edges() ) { |
213 | # my @out_edges = $edge->from()->outgoing(); |
214 | # my @in_edges = $edge->to()->incoming(); |
b49c4318 |
215 | |
52ce987f |
216 | # next if $edge->from() eq $graph->start(); |
217 | # next if $edge->to()->name() eq '#END#'; |
218 | # next unless scalar( @out_edges ) == 1; |
219 | # next unless scalar( @in_edges ) == 1; |
220 | # next unless $out_edges[0] eq $in_edges[0]; |
221 | # # In theory if we've got this far, we're safe, but just to |
222 | # # double-check... |
223 | # next unless $out_edges[0] eq $edge; |
b49c4318 |
224 | |
52ce987f |
225 | # $graph->merge_nodes( $edge->from(), $edge->to(), ' ' ); |
226 | # } |
227 | |
228 | # Now walk the path for each witness, so that we can do the |
229 | # position calculations. |
230 | my $paths = {}; |
231 | foreach my $w ( keys %all_witnesses ) { |
232 | my $back = undef; |
233 | if( $w =~ /^(.*)\s*\(p\.\s*c\.\)/ ) { |
234 | $back = $1; |
235 | } |
236 | my @wit_nodes = $graph->node_sequence( $graph->start, |
237 | $graph->node( '#END#' ), |
238 | $w, $back ); |
239 | my @wn_names = map { $_->name() } @wit_nodes; |
240 | $paths->{$w} = \@wn_names; |
b49c4318 |
241 | } |
52ce987f |
242 | $DB::single = 1; |
243 | my @common_nodes = grep { $graph->is_common( $_ ) } $graph->nodes(); |
244 | $graph->make_positions( \@common_nodes, $paths ); |
b49c4318 |
245 | } |
246 | |
2ceca8c3 |
247 | =item B<read_base> |
248 | |
249 | my @line_beginnings = read_base( 'reference.txt', $graph ); |
250 | |
251 | Takes a text file and a (presumed empty) graph object, adds the words |
252 | as simple linear nodes to the graph, and returns a list of nodes that |
253 | represent the beginning of lines. This graph is now the starting point |
254 | for application of apparatus entries in merge_base, e.g. from a CSV |
255 | file or a Classical Text Editor file. |
256 | |
257 | =cut |
b49c4318 |
258 | |
259 | sub read_base { |
260 | my( $base_file, $graph ) = @_; |
261 | |
262 | # This array gives the first node for each line. We put the |
263 | # common starting point in line zero. |
264 | my $last_node = $graph->start(); |
265 | my $lineref_array = [ $last_node ]; # There is no line zero. |
266 | |
267 | open( BASE, $base_file ) or die "Could not open file $base_file: $!"; |
268 | while(<BASE>) { |
269 | # Make the nodes, and connect them up for the base, but also |
270 | # save the first node of each line in an array for the purpose. |
271 | chomp; |
272 | my @words = split; |
273 | my $started = 0; |
274 | my $wordref = 0; |
275 | my $lineref = scalar @$lineref_array; |
276 | foreach my $w ( @words ) { |
277 | my $noderef = join( ',', $lineref, ++$wordref ); |
278 | my $node = $graph->add_node( $noderef ); |
279 | $node->set_attribute( 'label', $w ); |
280 | $node->set_attribute( 'class', 'common' ); |
281 | unless( $started ) { |
282 | push( @$lineref_array, $node ); |
283 | $started = 1; |
284 | } |
285 | if( $last_node ) { |
e49731d7 |
286 | my $edge = $graph->add_edge( $last_node, $node, "base text" ); |
287 | $edge->set_attribute( 'class', 'basetext' ); |
b49c4318 |
288 | $last_node = $node; |
289 | } # TODO there should be no else here... |
290 | } |
291 | } |
292 | close BASE; |
293 | # Ending point for all texts |
294 | my $endpoint = $graph->add_node( '#END#' ); |
295 | $graph->add_edge( $last_node, $endpoint, "base text" ); |
296 | push( @$lineref_array, $endpoint ); |
297 | |
298 | return( @$lineref_array ); |
299 | } |
300 | |
e49731d7 |
301 | =item B<collate_variants> |
2ceca8c3 |
302 | |
e49731d7 |
303 | collate_variants( $graph, @readings ) |
2ceca8c3 |
304 | |
e49731d7 |
305 | Given a set of readings in the form |
306 | ( lemma_start, lemma_end, rdg1_start, rdg1_end, ... ) |
2ceca8c3 |
307 | walks through each to identify those nodes that are identical. The |
e49731d7 |
308 | graph is a Text::Tradition::Graph object; the elements of @readings are |
2ceca8c3 |
309 | Graph::Easy::Node objects that appear on the graph. |
b49c4318 |
310 | |
2ceca8c3 |
311 | TODO: Handle collapsed and non-collapsed transpositions. |
312 | |
313 | =cut |
b49c4318 |
314 | |
e49731d7 |
315 | sub collate_variants { |
316 | my( $graph, @readings ) = @_; |
317 | my $lemma_start = shift @readings; |
318 | my $lemma_end = shift @readings; |
52ce987f |
319 | my $detranspose = 0; |
b49c4318 |
320 | |
e49731d7 |
321 | # Start the list of distinct nodes with those nodes in the lemma. |
322 | my @distinct_nodes; |
b49c4318 |
323 | while( $lemma_start ne $lemma_end ) { |
e49731d7 |
324 | push( @distinct_nodes, [ $lemma_start, 'base text' ] ); |
b49c4318 |
325 | $lemma_start = $graph->next_word( $lemma_start ); |
326 | } |
e49731d7 |
327 | push( @distinct_nodes, [ $lemma_end, 'base text' ] ); |
b49c4318 |
328 | |
e49731d7 |
329 | |
330 | while( scalar @readings ) { |
331 | my( $var_start, $var_end ) = splice( @readings, 0, 2 ); |
332 | |
333 | # I want to look at the nodes in the variant and lemma, and |
334 | # collapse nodes that are the same word. This is mini-collation. |
335 | # Each word in the 'main' list can only be collapsed once with a |
336 | # word from the current reading. |
337 | my %collapsed = (); |
338 | |
339 | # Get the label. There will only be one outgoing edge to start |
340 | # with, so this is safe. |
341 | my @out = $var_start->outgoing(); |
342 | my $var_label = $out[0]->label(); |
343 | |
344 | my @variant_nodes; |
345 | while( $var_start ne $var_end ) { |
346 | push( @variant_nodes, $var_start ); |
347 | $var_start = $graph->next_word( $var_start, $var_label ); |
348 | } |
349 | push( @variant_nodes, $var_end ); |
350 | |
351 | # Go through the variant nodes, and if we find a lemma node that |
352 | # hasn't yet been collapsed with a node, equate them. If we do |
353 | # not, keep them to push onto the end of all_nodes. |
354 | my @remaining_nodes; |
355 | my $last_index = 0; |
356 | foreach my $w ( @variant_nodes ) { |
357 | my $word = $w->label(); |
358 | my $matched = 0; |
359 | foreach my $idx ( $last_index .. $#distinct_nodes ) { |
360 | my( $l, $edgelabel ) = @{$distinct_nodes[$idx]}; |
361 | if( $word eq cmp_str( $l ) ) { |
362 | next if exists( $collapsed{ $l->label } ) |
363 | && $collapsed{ $l->label } eq $l; |
364 | $matched = 1; |
365 | $last_index = $idx if $detranspose; |
366 | # Collapse the nodes. |
367 | printf STDERR "Merging nodes %s/%s and %s/%s\n", |
368 | $l->name, $l->label, $w->name, $w->label; |
369 | $graph->merge_nodes( $l, $w ); |
370 | $collapsed{ $l->label } = $l; |
371 | # Now collapse any multiple edges to and from the node. |
372 | remove_duplicate_edges( $graph, |
373 | $graph->prior_word( $l, $edgelabel ), $l ); |
374 | remove_duplicate_edges( $graph, $l, |
375 | $graph->next_word( $l, $edgelabel ) ); |
52ce987f |
376 | last if $matched; |
e49731d7 |
377 | } |
b49c4318 |
378 | } |
e49731d7 |
379 | push( @remaining_nodes, [ $w, $var_label ] ) unless $matched; |
b49c4318 |
380 | } |
e49731d7 |
381 | push( @distinct_nodes, @remaining_nodes) if scalar( @remaining_nodes ); |
b49c4318 |
382 | } |
383 | } |
384 | |
2ceca8c3 |
385 | =item B<remove_duplicate_edges> |
386 | |
387 | remove_duplicate_edges( $graph, $from, $to ); |
388 | |
389 | Given two nodes, reduce the number of edges between those nodes to |
390 | one. If neither edge represents a base text, combine their labels. |
391 | |
392 | =cut |
393 | |
b49c4318 |
394 | sub remove_duplicate_edges { |
395 | my( $graph, $from, $to ) = @_; |
396 | my @edges = $from->edges_to( $to ); |
397 | if( scalar @edges > 1 ) { |
398 | my @base = grep { $_->label eq 'base text' } @edges; |
399 | if ( scalar @base ) { |
400 | # Remove the edges that are not base. |
401 | foreach my $e ( @edges ) { |
402 | $graph->del_edge( $e ) |
403 | unless $e eq $base[0]; |
404 | } |
405 | } else { |
406 | # Combine the edges into one. |
407 | my $new_edge_name = join( ', ', map { $_->label() } @edges ); |
408 | my $new_edge = shift @edges; |
409 | $new_edge->set_attribute( 'label', $new_edge_name ); |
410 | foreach my $e ( @edges ) { |
411 | $graph->del_edge( $e ); |
412 | } |
413 | } |
414 | } |
415 | } |
416 | |
2ceca8c3 |
417 | =item B<cmp_str> |
418 | |
419 | Pretend you never saw this method. Really it needs to not be hardcoded. |
420 | |
421 | =cut |
422 | |
b49c4318 |
423 | sub cmp_str { |
424 | my( $node ) = @_; |
425 | my $word = $node->label(); |
426 | $word = lc( $word ); |
427 | $word =~ s/\W//g; |
428 | $word =~ s/v/u/g; |
429 | $word =~ s/j/i/g; |
430 | $word =~ s/cha/ca/g; |
431 | $word =~ s/quatuor/quattuor/g; |
432 | $word =~ s/ioannes/iohannes/g; |
433 | return $word; |
434 | } |
435 | |
2ceca8c3 |
436 | =back |
437 | |
438 | =head1 LICENSE |
439 | |
440 | This package is free software and is provided "as is" without express |
441 | or implied warranty. You can redistribute it and/or modify it under |
442 | the same terms as Perl itself. |
443 | |
444 | =head1 AUTHOR |
445 | |
446 | Tara L Andrews, aurum@cpan.org |
447 | |
448 | =cut |
449 | |
b49c4318 |
450 | 1; |