Commit | Line | Data |
22222af9 |
1 | package Text::Tradition::Collation::RelationshipStore; |
2 | |
3 | use strict; |
4 | use warnings; |
24efa55d |
5 | use Safe::Isa; |
63778331 |
6 | use Text::Tradition::Error; |
22222af9 |
7 | use Text::Tradition::Collation::Relationship; |
24efa55d |
8 | use Text::Tradition::Collation::RelationshipType; |
a1615ee4 |
9 | use TryCatch; |
22222af9 |
10 | |
11 | use Moose; |
12 | |
13 | =head1 NAME |
14 | |
2626f709 |
15 | Text::Tradition::Collation::RelationshipStore - Keeps track of the relationships |
16 | between readings in a given collation |
22222af9 |
17 | |
18 | =head1 DESCRIPTION |
19 | |
20 | Text::Tradition is a library for representation and analysis of collated |
21 | texts, particularly medieval ones. The RelationshipStore is an internal object |
22 | of the collation, to keep track of the defined relationships (both specific and |
23 | general) between readings. |
24 | |
3ae5e2ad |
25 | =begin testing |
26 | |
27 | use Text::Tradition; |
ee801e17 |
28 | use TryCatch; |
3ae5e2ad |
29 | |
30 | use_ok( 'Text::Tradition::Collation::RelationshipStore' ); |
31 | |
ee801e17 |
32 | # Add some relationships, and delete them |
33 | |
34 | my $cxfile = 't/data/Collatex-16.xml'; |
35 | my $t = Text::Tradition->new( |
56772e8c |
36 | 'name' => 'inline', |
37 | 'input' => 'CollateX', |
38 | 'file' => $cxfile, |
39 | ); |
ee801e17 |
40 | my $c = $t->collation; |
41 | |
f8331a4d |
42 | my @v1 = $c->add_relationship( 'n21', 'n22', { 'type' => 'lexical' } ); |
ee801e17 |
43 | is( scalar @v1, 1, "Added a single relationship" ); |
44 | is( $v1[0]->[0], 'n21', "Got correct node 1" ); |
45 | is( $v1[0]->[1], 'n22', "Got correct node 2" ); |
679f17e1 |
46 | my @v2 = $c->add_relationship( 'n24', 'n23', |
ee801e17 |
47 | { 'type' => 'spelling', 'scope' => 'global' } ); |
48 | is( scalar @v2, 2, "Added a global relationship with two instances" ); |
49 | @v1 = $c->del_relationship( 'n22', 'n21' ); |
50 | is( scalar @v1, 1, "Deleted first relationship" ); |
679f17e1 |
51 | @v2 = $c->del_relationship( 'n12', 'n13' ); |
ee801e17 |
52 | is( scalar @v2, 2, "Deleted second global relationship" ); |
681893aa |
53 | my @v3 = $c->del_relationship( 'n1', 'n2' ); |
54 | is( scalar @v3, 0, "Nothing deleted on non-existent relationship" ); |
ee801e17 |
55 | |
3ae5e2ad |
56 | =end testing |
57 | |
22222af9 |
58 | =head1 METHODS |
59 | |
60 | =head2 new( collation => $collation ); |
61 | |
62 | Creates a new relationship store for the given collation. |
63 | |
64 | =cut |
65 | |
66 | has 'collation' => ( |
67 | is => 'ro', |
68 | isa => 'Text::Tradition::Collation', |
69 | required => 1, |
70 | weak_ref => 1, |
71 | ); |
24efa55d |
72 | |
73 | =head2 types |
74 | |
75 | Registry of possible relationship types. See RelationshipType for more info. |
76 | |
77 | =cut |
78 | |
79 | has 'relationship_types' => ( |
80 | is => 'ro', |
81 | traits => ['Hash'], |
82 | handles => { |
83 | has_type => 'exists', |
84 | add_type => 'set', |
85 | type => 'get', |
86 | del_type => 'delete' |
87 | }, |
88 | ); |
22222af9 |
89 | |
90 | has 'scopedrels' => ( |
91 | is => 'ro', |
92 | isa => 'HashRef[HashRef[Text::Tradition::Collation::Relationship]]', |
93 | default => sub { {} }, |
94 | ); |
95 | |
96 | has 'graph' => ( |
97 | is => 'ro', |
98 | isa => 'Graph', |
99 | default => sub { Graph->new( undirected => 1 ) }, |
100 | handles => { |
101 | relationships => 'edges', |
102 | add_reading => 'add_vertex', |
103 | delete_reading => 'delete_vertex', |
24efa55d |
104 | }, |
22222af9 |
105 | ); |
106 | |
359944f7 |
107 | =head2 equivalence_graph() |
108 | |
109 | Returns an equivalence graph of the collation, in which all readings |
110 | related via a 'colocated' relationship are transformed into a single |
111 | vertex. Can be used to determine the validity of a new relationship. |
112 | |
113 | =cut |
114 | |
115 | has 'equivalence_graph' => ( |
116 | is => 'ro', |
117 | isa => 'Graph', |
118 | default => sub { Graph->new() }, |
e1083e99 |
119 | writer => '_reset_equivalence', |
359944f7 |
120 | ); |
121 | |
122 | has '_node_equivalences' => ( |
123 | is => 'ro', |
124 | traits => ['Hash'], |
125 | handles => { |
126 | equivalence => 'get', |
127 | set_equivalence => 'set', |
128 | remove_equivalence => 'delete', |
04482188 |
129 | _clear_equivalence => 'clear', |
24efa55d |
130 | }, |
359944f7 |
131 | ); |
132 | |
133 | has '_equivalence_readings' => ( |
134 | is => 'ro', |
135 | traits => ['Hash'], |
136 | handles => { |
137 | eqreadings => 'get', |
138 | set_eqreadings => 'set', |
139 | remove_eqreadings => 'delete', |
04482188 |
140 | _clear_eqreadings => 'clear', |
24efa55d |
141 | }, |
359944f7 |
142 | ); |
143 | |
24efa55d |
144 | ## Build function - here we have our default set of relationship types. |
145 | |
146 | sub BUILD { |
147 | my $self = shift; |
148 | |
24efa55d |
149 | my @DEFAULT_TYPES = ( |
150 | { name => 'collated', bindlevel => 50, is_weak => 1, is_transitive => 0, is_generalizable => 0 }, |
c7bd2768 |
151 | { name => 'orthographic', bindlevel => 0, use_regular => 0 }, |
152 | { name => 'spelling', bindlevel => 1 }, |
153 | { name => 'punctuation', bindlevel => 2 }, |
154 | { name => 'grammatical', bindlevel => 2 }, |
155 | { name => 'lexical', bindlevel => 2 }, |
156 | { name => 'uncertain', bindlevel => 50, is_transitive => 0, is_generalizable => 0 }, |
157 | { name => 'other', bindlevel => 50, is_transitive => 0, is_generalizable => 0 }, |
24efa55d |
158 | { name => 'transposition', bindlevel => 50, is_colocation => 0, is_transitive => 0 }, |
159 | { name => 'repetition', bindlevel => 50, is_colocation => 0, is_transitive => 0 } |
160 | ); |
161 | |
162 | foreach my $type ( @DEFAULT_TYPES ) { |
163 | $self->add_type( $type ); |
164 | } |
165 | } |
166 | |
24efa55d |
167 | around add_type => sub { |
168 | my $orig = shift; |
169 | my $self = shift; |
170 | my $new_type; |
171 | if( @_ == 1 && $_[0]->$_isa( 'Text::Tradition::Collation::RelationshipType' ) ) { |
172 | $new_type = shift; |
173 | } else { |
174 | my %args = @_ == 1 ? %{$_[0]} : @_; |
175 | $new_type = Text::Tradition::Collation::RelationshipType->new( %args ); |
176 | } |
177 | $self->$orig( $new_type->name => $new_type ); |
178 | return $new_type; |
179 | }; |
180 | |
359944f7 |
181 | around add_reading => sub { |
182 | my $orig = shift; |
183 | my $self = shift; |
184 | |
185 | $self->equivalence_graph->add_vertex( @_ ); |
186 | $self->set_equivalence( $_[0], $_[0] ); |
187 | $self->set_eqreadings( $_[0], [ $_[0] ] ); |
188 | $self->$orig( @_ ); |
189 | }; |
190 | |
191 | around delete_reading => sub { |
192 | my $orig = shift; |
193 | my $self = shift; |
194 | |
359944f7 |
195 | $self->_remove_equivalence_node( @_ ); |
196 | $self->$orig( @_ ); |
197 | }; |
198 | |
3ae5e2ad |
199 | =head2 get_relationship |
200 | |
201 | Return the relationship object, if any, that exists between two readings. |
202 | |
203 | =cut |
204 | |
205 | sub get_relationship { |
4633f9e4 |
206 | my $self = shift; |
207 | my @vector; |
208 | if( @_ == 1 && ref( $_[0] ) eq 'ARRAY' ) { |
209 | # Dereference the edge arrayref that was passed. |
210 | my $edge = shift; |
211 | @vector = @$edge; |
212 | } else { |
213 | @vector = @_; |
214 | } |
3ae5e2ad |
215 | my $relationship; |
216 | if( $self->graph->has_edge_attribute( @vector, 'object' ) ) { |
217 | $relationship = $self->graph->get_edge_attribute( @vector, 'object' ); |
ca6e6095 |
218 | } |
3ae5e2ad |
219 | return $relationship; |
220 | } |
221 | |
222 | sub _set_relationship { |
223 | my( $self, $relationship, @vector ) = @_; |
224 | $self->graph->add_edge( @vector ); |
225 | $self->graph->set_edge_attribute( @vector, 'object', $relationship ); |
176badfe |
226 | $self->_make_equivalence( @vector ) if $relationship->colocated; |
3ae5e2ad |
227 | } |
a1615ee4 |
228 | |
22222af9 |
229 | =head2 create |
230 | |
231 | Create a new relationship with the given options and return it. |
232 | Warn and return undef if the relationship cannot be created. |
233 | |
234 | =cut |
235 | |
236 | sub create { |
237 | my( $self, $options ) = @_; |
238 | # Check to see if a relationship exists between the two given readings |
239 | my $source = delete $options->{'orig_a'}; |
240 | my $target = delete $options->{'orig_b'}; |
3ae5e2ad |
241 | my $rel = $self->get_relationship( $source, $target ); |
242 | if( $rel ) { |
24efa55d |
243 | if( $self->type( $rel->type )->is_weak ) { |
244 | # Always replace a weak relationship with a more descriptive |
3d14b48e |
245 | # one, if asked. |
246 | $self->del_relationship( $source, $target ); |
247 | } elsif( $rel->type ne $options->{'type'} ) { |
63778331 |
248 | throw( "Another relationship of type " . $rel->type |
249 | . " already exists between $source and $target" ); |
22222af9 |
250 | } else { |
251 | return $rel; |
252 | } |
253 | } |
254 | |
99ab9535 |
255 | $rel = Text::Tradition::Collation::Relationship->new( $options ); |
24efa55d |
256 | my $reltype = $self->type( $rel->type ); |
c7bd2768 |
257 | throw( "Unrecognized relationship type " . $rel->type ) unless $reltype; |
24efa55d |
258 | # Validate the options given against the relationship type wanted |
259 | throw( "Cannot set nonlocal scope on relationship of type " . $reltype->name ) |
260 | if $rel->nonlocal && !$reltype->is_generalizable; |
261 | |
99ab9535 |
262 | $self->add_scoped_relationship( $rel ) if $rel->nonlocal; |
263 | return $rel; |
22222af9 |
264 | } |
265 | |
266 | =head2 add_scoped_relationship( $rel ) |
267 | |
268 | Keep track of relationships defined between specific readings that are scoped |
269 | non-locally. Key on whichever reading occurs first alphabetically. |
270 | |
271 | =cut |
272 | |
273 | sub add_scoped_relationship { |
274 | my( $self, $rel ) = @_; |
24efa55d |
275 | my $rdga = $rel->reading_a; |
276 | my $rdgb = $rel->reading_b; |
f222800e |
277 | my $r = $self->scoped_relationship( $rdga, $rdgb ); |
22222af9 |
278 | if( $r ) { |
279 | warn sprintf( "Scoped relationship of type %s already exists between %s and %s", |
f222800e |
280 | $r->type, $rdga, $rdgb ); |
22222af9 |
281 | return; |
282 | } |
f222800e |
283 | my( $first, $second ) = sort ( $rdga, $rdgb ); |
284 | $self->scopedrels->{$first}->{$second} = $rel; |
22222af9 |
285 | } |
286 | |
287 | =head2 scoped_relationship( $reading_a, $reading_b ) |
288 | |
289 | Returns the general (document-level or global) relationship that has been defined |
290 | between the two reading strings. Returns undef if there is no general relationship. |
291 | |
292 | =cut |
293 | |
294 | sub scoped_relationship { |
295 | my( $self, $rdga, $rdgb ) = @_; |
296 | my( $first, $second ) = sort( $rdga, $rdgb ); |
297 | if( exists $self->scopedrels->{$first}->{$second} ) { |
298 | return $self->scopedrels->{$first}->{$second}; |
24efa55d |
299 | } |
300 | return undef; |
22222af9 |
301 | } |
302 | |
303 | =head2 add_relationship( $self, $source, $sourcetext, $target, $targettext, $opts ) |
304 | |
305 | Adds the relationship specified in $opts (see Text::Tradition::Collation::Relationship |
306 | for the possible options) between the readings given in $source and $target. Sets |
307 | up a scoped relationship between $sourcetext and $targettext if the relationship is |
308 | scoped non-locally. |
309 | |
310 | Returns a status boolean and a list of all reading pairs connected by the call to |
311 | add_relationship. |
312 | |
6d381462 |
313 | =begin testing |
314 | |
56772e8c |
315 | use Test::Warn; |
6d381462 |
316 | use Text::Tradition; |
317 | use TryCatch; |
318 | |
56772e8c |
319 | my $t1; |
e92d4229 |
320 | warnings_exist { |
56772e8c |
321 | $t1 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/legendfrag.xml' ); |
e92d4229 |
322 | } [qr/Cannot set relationship on a meta reading/], |
56772e8c |
323 | "Got expected relationship drop warning on parse"; |
324 | |
176badfe |
325 | # Test 1.1: try to equate nodes that are prevented with an intermediate collation |
6d381462 |
326 | ok( $t1, "Parsed test fragment file" ); |
327 | my $c1 = $t1->collation; |
10e4b1ac |
328 | my $trel = $c1->get_relationship( 'r9.2', 'r9.3' ); |
6d381462 |
329 | is( ref( $trel ), 'Text::Tradition::Collation::Relationship', |
330 | "Troublesome relationship exists" ); |
331 | is( $trel->type, 'collated', "Troublesome relationship is a collation" ); |
332 | |
333 | # Try to make the link we want |
334 | try { |
10e4b1ac |
335 | $c1->add_relationship( 'r8.6', 'r10.3', { 'type' => 'orthographic' } ); |
6d381462 |
336 | ok( 1, "Added cross-collation relationship as expected" ); |
176badfe |
337 | } catch( Text::Tradition::Error $e ) { |
338 | ok( 0, "Existing collation blocked equivalence relationship: " . $e->message ); |
6d381462 |
339 | } |
340 | |
341 | try { |
342 | $c1->calculate_ranks(); |
343 | ok( 1, "Successfully calculated ranks" ); |
176badfe |
344 | } catch ( Text::Tradition::Error $e ) { |
345 | ok( 0, "Collation now has a cycle: " . $e->message ); |
6d381462 |
346 | } |
347 | |
176badfe |
348 | # Test 1.2: attempt merge of an identical reading |
359944f7 |
349 | try { |
10e4b1ac |
350 | $c1->merge_readings( 'r9.3', 'r11.5' ); |
359944f7 |
351 | ok( 1, "Successfully merged reading 'pontifex'" ); |
352 | } catch ( Text::Tradition::Error $e ) { |
353 | ok( 0, "Merge of mergeable readings failed: $e->message" ); |
354 | |
355 | } |
356 | |
176badfe |
357 | # Test 1.3: attempt relationship with a meta reading (should fail) |
358 | try { |
10e4b1ac |
359 | $c1->add_relationship( 'r8.1', 'r9.2', { 'type' => 'collated' } ); |
176badfe |
360 | ok( 0, "Allowed a meta-reading to be used in a relationship" ); |
361 | } catch ( Text::Tradition::Error $e ) { |
362 | is( $e->message, 'Cannot set relationship on a meta reading', |
363 | "Relationship link prevented for a meta reading" ); |
364 | } |
365 | |
beb47b16 |
366 | # Test 1.4: try to break a relationship near a meta reading |
367 | $c1->add_relationship( 'r7.6', 'r7.3', { type => 'orthographic' } ); |
368 | try { |
369 | $c1->del_relationship( 'r7.6', 'r7.7' ); |
370 | $c1->del_relationship( 'r7.6', 'r7.3' ); |
371 | ok( 1, "Relationship broken with a meta reading as neighbor" ); |
372 | } catch { |
373 | ok( 0, "Relationship deletion failed with a meta reading as neighbor" ); |
374 | } |
375 | |
176badfe |
376 | # Test 2.1: try to equate nodes that are prevented with a real intermediate |
6d381462 |
377 | # equivalence |
56772e8c |
378 | my $t2; |
e92d4229 |
379 | warnings_exist { |
56772e8c |
380 | $t2 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/legendfrag.xml' ); |
e92d4229 |
381 | } [qr/Cannot set relationship on a meta reading/], |
56772e8c |
382 | "Got expected relationship drop warning on parse"; |
6d381462 |
383 | my $c2 = $t2->collation; |
10e4b1ac |
384 | $c2->add_relationship( 'r9.2', 'r9.3', { 'type' => 'lexical' } ); |
385 | my $trel2 = $c2->get_relationship( 'r9.2', 'r9.3' ); |
6d381462 |
386 | is( ref( $trel2 ), 'Text::Tradition::Collation::Relationship', |
387 | "Created blocking relationship" ); |
388 | is( $trel2->type, 'lexical', "Blocking relationship is not a collation" ); |
389 | # This time the link ought to fail |
390 | try { |
10e4b1ac |
391 | $c2->add_relationship( 'r8.6', 'r10.3', { 'type' => 'orthographic' } ); |
414cc046 |
392 | ok( 0, "Added cross-equivalent bad relationship" ); |
176badfe |
393 | } catch ( Text::Tradition::Error $e ) { |
394 | like( $e->message, qr/witness loop/, |
395 | "Existing equivalence blocked crossing relationship" ); |
6d381462 |
396 | } |
397 | |
398 | try { |
399 | $c2->calculate_ranks(); |
400 | ok( 1, "Successfully calculated ranks" ); |
176badfe |
401 | } catch ( Text::Tradition::Error $e ) { |
402 | ok( 0, "Collation now has a cycle: " . $e->message ); |
6d381462 |
403 | } |
404 | |
176badfe |
405 | # Test 3.1: make a straightforward pair of transpositions. |
cc31ebaa |
406 | my $t3 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/lf2.xml' ); |
407 | # Test 1: try to equate nodes that are prevented with an intermediate collation |
408 | my $c3 = $t3->collation; |
409 | try { |
10e4b1ac |
410 | $c3->add_relationship( 'r36.4', 'r38.3', { 'type' => 'transposition' } ); |
cc31ebaa |
411 | ok( 1, "Added straightforward transposition" ); |
176badfe |
412 | } catch ( Text::Tradition::Error $e ) { |
413 | ok( 0, "Failed to add normal transposition: " . $e->message ); |
cc31ebaa |
414 | } |
415 | try { |
10e4b1ac |
416 | $c3->add_relationship( 'r36.3', 'r38.2', { 'type' => 'transposition' } ); |
cc31ebaa |
417 | ok( 1, "Added straightforward transposition complement" ); |
176badfe |
418 | } catch ( Text::Tradition::Error $e ) { |
419 | ok( 0, "Failed to add normal transposition complement: " . $e->message ); |
cc31ebaa |
420 | } |
421 | |
176badfe |
422 | # Test 3.2: try to make a transposition that could be a parallel. |
cc31ebaa |
423 | try { |
10e4b1ac |
424 | $c3->add_relationship( 'r28.2', 'r29.2', { 'type' => 'transposition' } ); |
cc31ebaa |
425 | ok( 0, "Added bad colocated transposition" ); |
176badfe |
426 | } catch ( Text::Tradition::Error $e ) { |
427 | like( $e->message, qr/Readings appear to be colocated/, |
428 | "Prevented bad colocated transposition" ); |
cc31ebaa |
429 | } |
430 | |
176badfe |
431 | # Test 3.3: make the parallel, and then make the transposition again. |
cc31ebaa |
432 | try { |
10e4b1ac |
433 | $c3->add_relationship( 'r28.3', 'r29.3', { 'type' => 'orthographic' } ); |
cc31ebaa |
434 | ok( 1, "Equated identical readings for transposition" ); |
176badfe |
435 | } catch ( Text::Tradition::Error $e ) { |
436 | ok( 0, "Failed to equate identical readings: " . $e->message ); |
cc31ebaa |
437 | } |
438 | try { |
10e4b1ac |
439 | $c3->add_relationship( 'r28.2', 'r29.2', { 'type' => 'transposition' } ); |
cc31ebaa |
440 | ok( 1, "Added straightforward transposition complement" ); |
176badfe |
441 | } catch ( Text::Tradition::Error $e ) { |
442 | ok( 0, "Failed to add normal transposition complement: " . $e->message ); |
cc31ebaa |
443 | } |
444 | |
c7bd2768 |
445 | # TODO Test 4: make a global relationship that involves re-ranking a node first, when |
446 | # the prior rank has a potential match too |
447 | my $t4 = Text::Tradition->new( 'input' => 'Self', 'file' => 't/data/globalrel_test.xml' ); |
448 | |
449 | |
6d381462 |
450 | =end testing |
451 | |
22222af9 |
452 | =cut |
453 | |
454 | sub add_relationship { |
414cc046 |
455 | my( $self, $source, $target, $options ) = @_; |
456 | my $c = $self->collation; |
176badfe |
457 | my $sourceobj = $c->reading( $source ); |
458 | my $targetobj = $c->reading( $target ); |
359944f7 |
459 | throw( "Adding self relationship at $source" ) if $source eq $target; |
176badfe |
460 | throw( "Cannot set relationship on a meta reading" ) |
461 | if( $sourceobj->is_meta || $targetobj->is_meta ); |
ca6e6095 |
462 | my $relationship; |
24efa55d |
463 | my $reltype; |
c7bd2768 |
464 | my $thispaironly = delete $options->{thispaironly}; |
414cc046 |
465 | my $droppedcolls = []; |
c7bd2768 |
466 | $DB::single = 1 if $source eq 'r796.3' && $target eq 'r796.4'; |
ca6e6095 |
467 | if( ref( $options ) eq 'Text::Tradition::Collation::Relationship' ) { |
468 | $relationship = $options; |
24efa55d |
469 | $reltype = $self->type( $relationship->type ); |
ca6e6095 |
470 | $thispaironly = 1; # If existing rel, set only where asked. |
24efa55d |
471 | # Test the validity |
414cc046 |
472 | my( $is_valid, $reason ) = $self->relationship_valid( $source, $target, |
24efa55d |
473 | $relationship->type, $droppedcolls ); |
ca6e6095 |
474 | unless( $is_valid ) { |
475 | throw( "Invalid relationship: $reason" ); |
476 | } |
24efa55d |
477 | } else { |
478 | $reltype = $self->type( $options->{type} ); |
ca6e6095 |
479 | |
480 | # Try to create the relationship object. |
c7bd2768 |
481 | my $rdga = $reltype->regularize( $sourceobj ); |
482 | my $rdgb = $reltype->regularize( $targetobj ); |
24efa55d |
483 | $options->{'orig_a'} = $sourceobj; |
484 | $options->{'orig_b'} = $targetobj; |
485 | $options->{'reading_a'} = $rdga; |
486 | $options->{'reading_b'} = $rdgb; |
487 | if( exists $options->{'scope'} && $options->{'scope'} ne 'local' ) { |
0ac5e750 |
488 | # Is there a relationship with this a & b already? |
24efa55d |
489 | if( $rdga eq $rdgb ) { |
490 | # If we have canonified to the same thing for the relationship |
491 | # type we want, something is wrong. |
492 | # NOTE we want to allow this at the local level, as a cheap means |
493 | # of merging readings in the UI, until we get a better means. |
494 | throw( "Canonifier returns identical form $rdga for this relationship type" ); |
495 | } |
496 | |
f222800e |
497 | my $otherrel = $self->scoped_relationship( $rdga, $rdgb ); |
0ac5e750 |
498 | if( $otherrel && $otherrel->type eq $options->{type} |
499 | && $otherrel->scope eq $options->{scope} ) { |
24efa55d |
500 | # warn "Applying existing scoped relationship for $rdga / $rdgb"; |
0ac5e750 |
501 | $relationship = $otherrel; |
99ab9535 |
502 | } elsif( $otherrel ) { |
24efa55d |
503 | throw( 'Conflicting scoped relationship ' |
504 | . join( '/', $otherrel->type, $otherrel->scope ) . ' vs. ' |
505 | . join( '/', $options->{type}, $options->{scope} ) |
506 | . " for $rdga / $rdgb at $source / $target" ); |
0ac5e750 |
507 | } |
508 | } |
24efa55d |
509 | $relationship = $self->create( $options ) unless $relationship; |
510 | # ... Will throw on error |
511 | |
512 | # See if the relationship is actually valid here |
513 | my( $is_valid, $reason ) = $self->relationship_valid( $source, $target, |
514 | $options->{'type'}, $droppedcolls ); |
515 | unless( $is_valid ) { |
516 | throw( "Invalid relationship: $reason" ); |
517 | } |
22222af9 |
518 | } |
ca6e6095 |
519 | |
22222af9 |
520 | |
22222af9 |
521 | # Now set the relationship(s). |
522 | my @pairs_set; |
414cc046 |
523 | my $rel = $self->get_relationship( $source, $target ); |
cc31ebaa |
524 | my $skip; |
414cc046 |
525 | if( $rel && $rel ne $relationship ) { |
526 | if( $rel->nonlocal ) { |
527 | throw( "Found conflicting relationship at $source - $target" ); |
24efa55d |
528 | } elsif( !$reltype->is_weak ) { |
529 | # Replace a weak relationship; leave any other sort in place. |
414cc046 |
530 | my $r1ann = $rel->has_annotation ? $rel->annotation : ''; |
531 | my $r2ann = $relationship->has_annotation ? $relationship->annotation : ''; |
532 | unless( $rel->type eq $relationship->type && $r1ann eq $r2ann ) { |
533 | warn sprintf( "Not overriding local relationship %s with global %s " |
534 | . "set at %s -> %s (%s -> %s)", $rel->type, $relationship->type, |
535 | $source, $target, $rel->reading_a, $rel->reading_b ); |
414cc046 |
536 | } |
24efa55d |
537 | $skip = 1; |
414cc046 |
538 | } |
539 | } |
cc31ebaa |
540 | $self->_set_relationship( $relationship, $source, $target ) unless $skip; |
414cc046 |
541 | push( @pairs_set, [ $source, $target ] ); |
542 | |
428bcf0b |
543 | # Find all the pairs for which we need to set the relationship. |
544 | if( $relationship->colocated && $relationship->nonlocal && !$thispaironly ) { |
545 | push( @pairs_set, $self->add_global_relationship( $relationship ) ); |
22222af9 |
546 | } |
414cc046 |
547 | # Finally, restore whatever collations we can, and return. |
24efa55d |
548 | $self->_restore_weak( @$droppedcolls ); |
63778331 |
549 | return @pairs_set; |
22222af9 |
550 | } |
551 | |
428bcf0b |
552 | =head2 add_global_relationship( $options, $skipvector ) |
553 | |
554 | Adds the relationship specified wherever the relevant readings appear together |
555 | in the graph. Options as in add_relationship above. |
556 | |
557 | =cut |
558 | |
559 | sub add_global_relationship { |
24efa55d |
560 | my( $self, $relationship ) = @_; |
428bcf0b |
561 | # Sanity checking |
24efa55d |
562 | my $reltype = $self->type( $relationship->type ); |
428bcf0b |
563 | throw( "Relationship passed to add_global is not global" ) |
564 | unless $relationship->nonlocal; |
565 | throw( "Relationship passed to add_global is not a valid global type" ) |
24efa55d |
566 | unless $reltype->is_generalizable; |
428bcf0b |
567 | |
568 | # Apply the relationship wherever it is valid |
569 | my @pairs_set; |
570 | foreach my $v ( $self->_find_applicable( $relationship ) ) { |
571 | my $exists = $self->get_relationship( @$v ); |
24efa55d |
572 | my $etype = $exists ? $self->type( $exists->type ) : ''; |
573 | if( $exists && !$etype->is_weak ) { |
574 | unless( $exists->is_equivalent( $relationship ) ) { |
575 | throw( "Found conflicting relationship at @$v" ); |
576 | } |
428bcf0b |
577 | } else { |
24efa55d |
578 | my @added; |
579 | try { |
580 | @added = $self->add_relationship( @$v, $relationship ); |
581 | } catch { |
582 | my $reldesc = sprintf( "%s %s -> %s", $relationship->type, |
583 | $relationship->reading_a, $relationship->reading_b ); |
584 | print STDERR "Global relationship $reldesc not applicable at @$v\n"; |
585 | } |
586 | push( @pairs_set, @added ) if @added; |
428bcf0b |
587 | } |
588 | } |
589 | return @pairs_set; |
590 | } |
591 | |
592 | |
9d829138 |
593 | =head2 del_scoped_relationship( $reading_a, $reading_b ) |
594 | |
595 | Returns the general (document-level or global) relationship that has been defined |
596 | between the two reading strings. Returns undef if there is no general relationship. |
597 | |
598 | =cut |
599 | |
600 | sub del_scoped_relationship { |
601 | my( $self, $rdga, $rdgb ) = @_; |
602 | my( $first, $second ) = sort( $rdga, $rdgb ); |
603 | return delete $self->scopedrels->{$first}->{$second}; |
604 | } |
605 | |
bf6e338d |
606 | sub _find_applicable { |
607 | my( $self, $rel ) = @_; |
608 | my $c = $self->collation; |
24efa55d |
609 | my $reltype = $self->type( $rel->type ); |
bf6e338d |
610 | my @vectors; |
611 | my @identical_readings; |
c7bd2768 |
612 | @identical_readings = grep { $reltype->regularize( $_ ) eq $rel->reading_a } |
24efa55d |
613 | $c->readings; |
bf6e338d |
614 | foreach my $ir ( @identical_readings ) { |
615 | my @itarget; |
c7bd2768 |
616 | @itarget = grep { $reltype->regularize( $_ ) eq $rel->reading_b } |
24efa55d |
617 | $c->readings_at_rank( $ir->rank ); |
bf6e338d |
618 | if( @itarget ) { |
24efa55d |
619 | # Warn if there is more than one hit with no closer link between them. |
bf6e338d |
620 | my $itmain = shift @itarget; |
621 | if( @itarget ) { |
622 | my %all_targets; |
24efa55d |
623 | my $bindlevel = $reltype->bindlevel; |
bf6e338d |
624 | map { $all_targets{$_} = 1 } @itarget; |
625 | map { delete $all_targets{$_} } |
24efa55d |
626 | $self->related_readings( $itmain, sub { |
627 | $self->type( $_[0]->type )->bindlevel < $bindlevel } ); |
bf6e338d |
628 | warn "More than one unrelated reading with text " . $itmain->text |
629 | . " at rank " . $ir->rank . "!" if keys %all_targets; |
630 | } |
631 | push( @vectors, [ $ir->id, $itmain->id ] ); |
632 | } |
633 | } |
634 | return @vectors; |
635 | } |
636 | |
ee801e17 |
637 | =head2 del_relationship( $source, $target ) |
638 | |
639 | Removes the relationship between the given readings. If the relationship is |
640 | non-local, removes the relationship everywhere in the graph. |
641 | |
642 | =cut |
643 | |
644 | sub del_relationship { |
645 | my( $self, $source, $target ) = @_; |
646 | my $rel = $self->get_relationship( $source, $target ); |
681893aa |
647 | return () unless $rel; # Nothing to delete; return an empty set. |
24efa55d |
648 | my $reltype = $self->type( $rel->type ); |
359944f7 |
649 | my $colo = $rel->colocated; |
ee801e17 |
650 | my @vectors = ( [ $source, $target ] ); |
359944f7 |
651 | $self->_remove_relationship( $colo, $source, $target ); |
ee801e17 |
652 | if( $rel->nonlocal ) { |
653 | # Remove the relationship wherever it occurs. |
24efa55d |
654 | my @rel_edges = grep { $self->get_relationship( @$_ ) eq $rel } |
ee801e17 |
655 | $self->relationships; |
656 | foreach my $re ( @rel_edges ) { |
359944f7 |
657 | $self->_remove_relationship( $colo, @$re ); |
ee801e17 |
658 | push( @vectors, $re ); |
659 | } |
9d829138 |
660 | $self->del_scoped_relationship( $rel->reading_a, $rel->reading_b ); |
ee801e17 |
661 | } |
662 | return @vectors; |
663 | } |
664 | |
ca6e6095 |
665 | sub _remove_relationship { |
359944f7 |
666 | my( $self, $equiv, @vector ) = @_; |
ca6e6095 |
667 | $self->graph->delete_edge( @vector ); |
176badfe |
668 | $self->_break_equivalence( @vector ) if $equiv; |
ca6e6095 |
669 | } |
670 | |
22222af9 |
671 | =head2 relationship_valid( $source, $target, $type ) |
672 | |
673 | Checks whether a relationship of type $type may exist between the readings given |
674 | in $source and $target. Returns a tuple of ( status, message ) where status is |
675 | a yes/no boolean and, if the answer is no, message gives the reason why. |
676 | |
677 | =cut |
678 | |
679 | sub relationship_valid { |
414cc046 |
680 | my( $self, $source, $target, $rel, $mustdrop ) = @_; |
681 | $mustdrop = [] unless $mustdrop; # in case we were passed nothing |
22222af9 |
682 | my $c = $self->collation; |
24efa55d |
683 | my $reltype = $self->type( $rel ); |
10943ab0 |
684 | ## Assume validity is okay if we are initializing from scratch. |
3579c22b |
685 | return ( 1, "initializing" ) unless $c->tradition->_initialized; |
c7bd2768 |
686 | ## TODO Move this block to relationship type definition when we can save |
687 | ## coderefs |
24efa55d |
688 | if ( $rel eq 'transposition' || $rel eq 'repetition' ) { |
22222af9 |
689 | # Check that the two readings do (for a repetition) or do not (for |
690 | # a transposition) appear in the same witness. |
56772e8c |
691 | # TODO this might be called before witness paths are set... |
22222af9 |
692 | my %seen_wits; |
693 | map { $seen_wits{$_} = 1 } $c->reading_witnesses( $source ); |
694 | foreach my $w ( $c->reading_witnesses( $target ) ) { |
695 | if( $seen_wits{$w} ) { |
696 | return ( 0, "Readings both occur in witness $w" ) |
697 | if $rel eq 'transposition'; |
698 | return ( 1, "ok" ) if $rel eq 'repetition'; |
d6936dea |
699 | } |
22222af9 |
700 | } |
abadc997 |
701 | return ( 0, "Readings occur only in distinct witnesses" ) |
702 | if $rel eq 'repetition'; |
703 | } |
24efa55d |
704 | if ( $reltype->is_colocation ) { |
22222af9 |
705 | # Check that linking the source and target in a relationship won't lead |
414cc046 |
706 | # to a path loop for any witness. |
707 | # First, drop/stash any collations that might interfere |
708 | my $sourceobj = $c->reading( $source ); |
709 | my $targetobj = $c->reading( $target ); |
710 | my $sourcerank = $sourceobj->has_rank ? $sourceobj->rank : -1; |
711 | my $targetrank = $targetobj->has_rank ? $targetobj->rank : -1; |
712 | unless( $rel eq 'collated' || $sourcerank == $targetrank ) { |
24efa55d |
713 | push( @$mustdrop, $self->_drop_weak( $source ) ); |
714 | push( @$mustdrop, $self->_drop_weak( $target ) ); |
359944f7 |
715 | if( $c->end->has_rank ) { |
176badfe |
716 | foreach my $rk ( $sourcerank .. $targetrank ) { |
24efa55d |
717 | map { push( @$mustdrop, $self->_drop_weak( $_->id ) ) } |
414cc046 |
718 | $c->readings_at_rank( $rk ); |
719 | } |
720 | } |
a1615ee4 |
721 | } |
359944f7 |
722 | unless( $self->test_equivalence( $source, $target ) ) { |
24efa55d |
723 | $self->_restore_weak( @$mustdrop ); |
414cc046 |
724 | return( 0, "Relationship would create witness loop" ); |
a1615ee4 |
725 | } |
22222af9 |
726 | return ( 1, "ok" ); |
24efa55d |
727 | } else { |
728 | # We also need to check that the readings are not in the same place. |
729 | # That is, proposing to equate them should cause a witness loop. |
730 | if( $self->test_equivalence( $source, $target ) ) { |
731 | return ( 0, "Readings appear to be colocated" ); |
732 | } else { |
733 | return ( 1, "ok" ); |
734 | } |
22222af9 |
735 | } |
736 | } |
737 | |
24efa55d |
738 | sub _drop_weak { |
778251a6 |
739 | my( $self, $reading ) = @_; |
414cc046 |
740 | my @dropped; |
778251a6 |
741 | foreach my $n ( $self->graph->neighbors( $reading ) ) { |
24efa55d |
742 | my $nrel = $self->get_relationship( $reading, $n ); |
743 | if( $self->type( $nrel->type )->is_weak ) { |
744 | push( @dropped, [ $reading, $n, $nrel->type ] ); |
778251a6 |
745 | $self->del_relationship( $reading, $n ); |
24efa55d |
746 | #print STDERR "Dropped weak relationship $reading -> $n\n"; |
778251a6 |
747 | } |
748 | } |
414cc046 |
749 | return @dropped; |
750 | } |
751 | |
24efa55d |
752 | sub _restore_weak { |
414cc046 |
753 | my( $self, @vectors ) = @_; |
754 | foreach my $v ( @vectors ) { |
24efa55d |
755 | my $type = pop @$v; |
756 | eval { |
757 | $self->add_relationship( @$v, { 'type' => $type } ); |
758 | #print STDERR "Restored weak relationship @$v\n"; |
759 | }; # if it fails we don't care |
414cc046 |
760 | } |
778251a6 |
761 | } |
762 | |
cc31ebaa |
763 | =head2 filter_collations() |
764 | |
24efa55d |
765 | Utility function. Removes any redundant weak relationships from the graph. |
766 | A weak relationship is redundant if the readings in question would occupy |
cc31ebaa |
767 | the same rank regardless of the existence of the relationship. |
768 | |
769 | =cut |
770 | |
24efa55d |
771 | #TODO change name |
cc31ebaa |
772 | sub filter_collations { |
773 | my $self = shift; |
774 | my $c = $self->collation; |
775 | foreach my $r ( 1 .. $c->end->rank - 1 ) { |
776 | my $anchor; |
24efa55d |
777 | my @need_weak; |
cc31ebaa |
778 | foreach my $rdg ( $c->readings_at_rank( $r ) ) { |
779 | next if $rdg->is_meta; |
780 | my $ip = 0; |
781 | foreach my $pred ( $rdg->predecessors ) { |
782 | if( $pred->rank == $r - 1 ) { |
783 | $ip = 1; |
784 | $anchor = $rdg unless( $anchor ); |
785 | last; |
786 | } |
787 | } |
24efa55d |
788 | push( @need_weak, $rdg ) unless $ip; |
789 | $self->_drop_weak( $rdg->id ); |
cc31ebaa |
790 | } |
791 | $anchor |
24efa55d |
792 | # TODO FIX HACK of adding explicit collation type |
46e1fe14 |
793 | ? map { $c->add_relationship( $anchor, $_, { 'type' => 'collated' } ) |
24efa55d |
794 | unless $c->get_relationship( $anchor, $_ ) } @need_weak |
795 | : print STDERR "No anchor found at $r\n"; |
cc31ebaa |
796 | } |
797 | } |
798 | |
7f52eac8 |
799 | =head2 related_readings( $reading, $filter ) |
22222af9 |
800 | |
801 | Returns a list of readings that are connected via relationship links to $reading. |
7f52eac8 |
802 | If $filter is set to a subroutine ref, returns only those related readings where |
803 | $filter( $relationship ) returns a true value. |
22222af9 |
804 | |
805 | =cut |
806 | |
807 | sub related_readings { |
7f52eac8 |
808 | my( $self, $reading, $filter ) = @_; |
22222af9 |
809 | my $return_object; |
810 | if( ref( $reading ) eq 'Text::Tradition::Collation::Reading' ) { |
811 | $reading = $reading->id; |
812 | $return_object = 1; |
813 | } |
c84275ff |
814 | my @answer; |
7f52eac8 |
815 | if( $filter ) { |
816 | # Backwards compat |
817 | if( $filter eq 'colocated' ) { |
818 | $filter = sub { $_[0]->colocated }; |
d002ccb7 |
819 | } elsif( !ref( $filter ) ) { |
820 | my $type = $filter; |
821 | $filter = sub { $_[0]->type eq $type }; |
7f52eac8 |
822 | } |
c84275ff |
823 | my %found = ( $reading => 1 ); |
824 | my $check = [ $reading ]; |
825 | my $iter = 0; |
826 | while( @$check ) { |
c84275ff |
827 | my $more = []; |
828 | foreach my $r ( @$check ) { |
829 | foreach my $nr ( $self->graph->neighbors( $r ) ) { |
7f52eac8 |
830 | if( &$filter( $self->get_relationship( $r, $nr ) ) ) { |
c84275ff |
831 | push( @$more, $nr ) unless exists $found{$nr}; |
832 | $found{$nr} = 1; |
833 | } |
834 | } |
835 | } |
836 | $check = $more; |
22222af9 |
837 | } |
7f52eac8 |
838 | delete $found{$reading}; |
c84275ff |
839 | @answer = keys %found; |
840 | } else { |
841 | @answer = $self->graph->all_reachable( $reading ); |
22222af9 |
842 | } |
843 | if( $return_object ) { |
844 | my $c = $self->collation; |
c84275ff |
845 | return map { $c->reading( $_ ) } @answer; |
22222af9 |
846 | } else { |
c84275ff |
847 | return @answer; |
22222af9 |
848 | } |
849 | } |
850 | |
851 | =head2 merge_readings( $kept, $deleted ); |
852 | |
853 | Makes a best-effort merge of the relationship links between the given readings, and |
854 | stops tracking the to-be-deleted reading. |
855 | |
856 | =cut |
857 | |
858 | sub merge_readings { |
859 | my( $self, $kept, $deleted, $combined ) = @_; |
860 | foreach my $edge ( $self->graph->edges_at( $deleted ) ) { |
861 | # Get the pair of kept / rel |
862 | my @vector = ( $kept ); |
863 | push( @vector, $edge->[0] eq $deleted ? $edge->[1] : $edge->[0] ); |
864 | next if $vector[0] eq $vector[1]; # Don't add a self loop |
865 | |
866 | # If kept changes its text, drop the relationship. |
867 | next if $combined; |
868 | |
f222800e |
869 | # If kept / rel already has a relationship, just keep the old |
3ae5e2ad |
870 | my $rel = $self->get_relationship( @vector ); |
f222800e |
871 | next if $rel; |
22222af9 |
872 | |
873 | # Otherwise, adopt the relationship that would be deleted. |
3ae5e2ad |
874 | $rel = $self->get_relationship( @$edge ); |
875 | $self->_set_relationship( $rel, @vector ); |
22222af9 |
876 | } |
56772e8c |
877 | $self->_make_equivalence( $deleted, $kept ); |
22222af9 |
878 | } |
879 | |
359944f7 |
880 | ### Equivalence logic |
881 | |
882 | sub _remove_equivalence_node { |
883 | my( $self, $node ) = @_; |
884 | my $group = $self->equivalence( $node ); |
885 | my $nodelist = $self->eqreadings( $group ); |
886 | if( @$nodelist == 1 && $nodelist->[0] eq $node ) { |
3579c22b |
887 | $self->equivalence_graph->delete_vertex( $group ); |
359944f7 |
888 | $self->remove_eqreadings( $group ); |
3579c22b |
889 | $self->remove_equivalence( $group ); |
359944f7 |
890 | } elsif( @$nodelist == 1 ) { |
3579c22b |
891 | throw( "DATA INCONSISTENCY in equivalence graph: " . $nodelist->[0] . |
892 | " in group that should have only $node" ); |
359944f7 |
893 | } else { |
10e4b1ac |
894 | my @newlist = grep { $_ ne $node } @$nodelist; |
359944f7 |
895 | $self->set_eqreadings( $group, \@newlist ); |
896 | $self->remove_equivalence( $node ); |
897 | } |
898 | } |
899 | |
900 | =head2 add_equivalence_edge |
901 | |
176badfe |
902 | Add an edge in the equivalence graph corresponding to $source -> $target in the |
903 | collation. Should only be called by Collation. |
359944f7 |
904 | |
905 | =cut |
906 | |
907 | sub add_equivalence_edge { |
908 | my( $self, $source, $target ) = @_; |
909 | my $seq = $self->equivalence( $source ); |
910 | my $teq = $self->equivalence( $target ); |
359944f7 |
911 | $self->equivalence_graph->add_edge( $seq, $teq ); |
912 | } |
913 | |
176badfe |
914 | =head2 delete_equivalence_edge |
359944f7 |
915 | |
176badfe |
916 | Remove an edge in the equivalence graph corresponding to $source -> $target in the |
917 | collation. Should only be called by Collation. |
359944f7 |
918 | |
919 | =cut |
920 | |
921 | sub delete_equivalence_edge { |
922 | my( $self, $source, $target ) = @_; |
923 | my $seq = $self->equivalence( $source ); |
924 | my $teq = $self->equivalence( $target ); |
359944f7 |
925 | $self->equivalence_graph->delete_edge( $seq, $teq ); |
926 | } |
927 | |
928 | sub _is_disconnected { |
929 | my $self = shift; |
930 | return( scalar $self->equivalence_graph->predecessorless_vertices > 1 |
931 | || scalar $self->equivalence_graph->successorless_vertices > 1 ); |
932 | } |
933 | |
176badfe |
934 | # Equate two readings in the equivalence graph |
935 | sub _make_equivalence { |
56772e8c |
936 | my( $self, $source, $target ) = @_; |
359944f7 |
937 | # Get the source equivalent readings |
938 | my $seq = $self->equivalence( $source ); |
939 | my $teq = $self->equivalence( $target ); |
940 | # Nothing to do if they are already equivalent... |
941 | return if $seq eq $teq; |
56772e8c |
942 | my $sourcepool = $self->eqreadings( $seq ); |
359944f7 |
943 | # and add them to the target readings. |
56772e8c |
944 | push( @{$self->eqreadings( $teq )}, @$sourcepool ); |
945 | map { $self->set_equivalence( $_, $teq ) } @$sourcepool; |
359944f7 |
946 | # Then merge the nodes in the equivalence graph. |
947 | foreach my $pred ( $self->equivalence_graph->predecessors( $seq ) ) { |
56772e8c |
948 | $self->equivalence_graph->add_edge( $pred, $teq ); |
359944f7 |
949 | } |
950 | foreach my $succ ( $self->equivalence_graph->successors( $seq ) ) { |
56772e8c |
951 | $self->equivalence_graph->add_edge( $teq, $succ ); |
359944f7 |
952 | } |
953 | $self->equivalence_graph->delete_vertex( $seq ); |
176badfe |
954 | # TODO enable this after collation parsing is done |
10943ab0 |
955 | throw( "Graph got disconnected making $source / $target equivalence" ) |
3579c22b |
956 | if $self->_is_disconnected && $self->collation->tradition->_initialized; |
359944f7 |
957 | } |
958 | |
959 | =head2 test_equivalence |
960 | |
176badfe |
961 | Test whether, if two readings were equated with a 'colocated' relationship, |
962 | the graph would still be valid. |
359944f7 |
963 | |
964 | =cut |
965 | |
966 | sub test_equivalence { |
967 | my( $self, $source, $target ) = @_; |
968 | # Try merging the nodes in the equivalence graph; return a true value if |
969 | # no cycle is introduced thereby. Restore the original graph first. |
970 | |
971 | # Keep track of edges we add |
972 | my %added_pred; |
973 | my %added_succ; |
974 | # Get the reading equivalents |
975 | my $seq = $self->equivalence( $source ); |
976 | my $teq = $self->equivalence( $target ); |
977 | # Maybe this is easy? |
978 | return 1 if $seq eq $teq; |
979 | |
980 | # Save the first graph |
981 | my $checkstr = $self->equivalence_graph->stringify(); |
982 | # Add and save relevant edges |
983 | foreach my $pred ( $self->equivalence_graph->predecessors( $seq ) ) { |
984 | if( $self->equivalence_graph->has_edge( $pred, $teq ) ) { |
985 | $added_pred{$pred} = 0; |
986 | } else { |
987 | $self->equivalence_graph->add_edge( $pred, $teq ); |
988 | $added_pred{$pred} = 1; |
989 | } |
990 | } |
991 | foreach my $succ ( $self->equivalence_graph->successors( $seq ) ) { |
992 | if( $self->equivalence_graph->has_edge( $teq, $succ ) ) { |
993 | $added_succ{$succ} = 0; |
994 | } else { |
995 | $self->equivalence_graph->add_edge( $teq, $succ ); |
996 | $added_succ{$succ} = 1; |
997 | } |
998 | } |
999 | # Delete source equivalent and test |
1000 | $self->equivalence_graph->delete_vertex( $seq ); |
1001 | my $ret = !$self->equivalence_graph->has_a_cycle; |
1002 | |
1003 | # Restore what we changed |
1004 | $self->equivalence_graph->add_vertex( $seq ); |
1005 | foreach my $pred ( keys %added_pred ) { |
1006 | $self->equivalence_graph->add_edge( $pred, $seq ); |
1007 | $self->equivalence_graph->delete_edge( $pred, $teq ) if $added_pred{$pred}; |
1008 | } |
1009 | foreach my $succ ( keys %added_succ ) { |
1010 | $self->equivalence_graph->add_edge( $seq, $succ ); |
1011 | $self->equivalence_graph->delete_edge( $teq, $succ ) if $added_succ{$succ}; |
1012 | } |
1013 | unless( $self->equivalence_graph->eq( $checkstr ) ) { |
c7bd2768 |
1014 | throw( "GRAPH CHANGED after testing" ); |
359944f7 |
1015 | } |
1016 | # Return our answer |
1017 | return $ret; |
1018 | } |
1019 | |
176badfe |
1020 | # Unmake an equivalence link between two readings. Should only be called internally. |
1021 | sub _break_equivalence { |
359944f7 |
1022 | my( $self, $source, $target ) = @_; |
1023 | |
1024 | # This is the hard one. Need to reconstruct the equivalence groups without |
1025 | # the given link. |
1026 | my( %sng, %tng ); |
1027 | map { $sng{$_} = 1 } $self->_find_equiv_without( $source, $target ); |
1028 | map { $tng{$_} = 1 } $self->_find_equiv_without( $target, $source ); |
1029 | # If these groups intersect, they are still connected; do nothing. |
1030 | foreach my $el ( keys %tng ) { |
10e4b1ac |
1031 | return if( exists $sng{$el} ); |
359944f7 |
1032 | } |
359944f7 |
1033 | # If they don't intersect, then we split the nodes in the graph and in |
1034 | # the hashes. First figure out which group has which name |
176badfe |
1035 | my $oldgroup = $self->equivalence( $source ); # same as $target |
1036 | my $keepsource = $sng{$oldgroup}; |
1037 | my $newgroup = $keepsource ? $target : $source; |
359944f7 |
1038 | my( $oldmembers, $newmembers ); |
176badfe |
1039 | if( $keepsource ) { |
359944f7 |
1040 | $oldmembers = [ keys %sng ]; |
1041 | $newmembers = [ keys %tng ]; |
1042 | } else { |
1043 | $oldmembers = [ keys %tng ]; |
1044 | $newmembers = [ keys %sng ]; |
1045 | } |
1046 | |
1047 | # First alter the old group in the hash |
1048 | $self->set_eqreadings( $oldgroup, $oldmembers ); |
176badfe |
1049 | foreach my $el ( @$oldmembers ) { |
1050 | $self->set_equivalence( $el, $oldgroup ); |
1051 | } |
359944f7 |
1052 | |
1053 | # then add the new group back to the hash with its new key |
1054 | $self->set_eqreadings( $newgroup, $newmembers ); |
1055 | foreach my $el ( @$newmembers ) { |
1056 | $self->set_equivalence( $el, $newgroup ); |
1057 | } |
1058 | |
1059 | # Now add the new group back to the equivalence graph |
1060 | $self->equivalence_graph->add_vertex( $newgroup ); |
1061 | # ...add the appropriate edges to the source group vertext |
1062 | my $c = $self->collation; |
1063 | foreach my $rdg ( @$newmembers ) { |
1064 | foreach my $rp ( $c->sequence->predecessors( $rdg ) ) { |
beb47b16 |
1065 | next unless $self->equivalence( $rp ); |
359944f7 |
1066 | $self->equivalence_graph->add_edge( $self->equivalence( $rp ), $newgroup ); |
1067 | } |
1068 | foreach my $rs ( $c->sequence->successors( $rdg ) ) { |
beb47b16 |
1069 | next unless $self->equivalence( $rs ); |
359944f7 |
1070 | $self->equivalence_graph->add_edge( $newgroup, $self->equivalence( $rs ) ); |
1071 | } |
1072 | } |
1073 | |
1074 | # ...and figure out which edges on the old group vertex to delete. |
1075 | my( %old_pred, %old_succ ); |
1076 | foreach my $rdg ( @$oldmembers ) { |
1077 | foreach my $rp ( $c->sequence->predecessors( $rdg ) ) { |
beb47b16 |
1078 | next unless $self->equivalence( $rp ); |
359944f7 |
1079 | $old_pred{$self->equivalence( $rp )} = 1; |
1080 | } |
1081 | foreach my $rs ( $c->sequence->successors( $rdg ) ) { |
beb47b16 |
1082 | next unless $self->equivalence( $rs ); |
359944f7 |
1083 | $old_succ{$self->equivalence( $rs )} = 1; |
1084 | } |
1085 | } |
1086 | foreach my $p ( $self->equivalence_graph->predecessors( $oldgroup ) ) { |
1087 | unless( $old_pred{$p} ) { |
1088 | $self->equivalence_graph->delete_edge( $p, $oldgroup ); |
1089 | } |
1090 | } |
1091 | foreach my $s ( $self->equivalence_graph->successors( $oldgroup ) ) { |
1092 | unless( $old_succ{$s} ) { |
1093 | $self->equivalence_graph->delete_edge( $oldgroup, $s ); |
1094 | } |
1095 | } |
176badfe |
1096 | # TODO enable this after collation parsing is done |
10943ab0 |
1097 | throw( "Graph got disconnected breaking $source / $target equivalence" ) |
3579c22b |
1098 | if $self->_is_disconnected && $self->collation->tradition->_initialized; |
359944f7 |
1099 | } |
1100 | |
1101 | sub _find_equiv_without { |
1102 | my( $self, $first, $second ) = @_; |
1103 | my %found = ( $first => 1 ); |
1104 | my $check = [ $first ]; |
1105 | my $iter = 0; |
1106 | while( @$check ) { |
1107 | my $more = []; |
1108 | foreach my $r ( @$check ) { |
1109 | foreach my $nr ( $self->graph->neighbors( $r ) ) { |
1110 | next if $r eq $second; |
1111 | if( $self->get_relationship( $r, $nr )->colocated ) { |
1112 | push( @$more, $nr ) unless exists $found{$nr}; |
1113 | $found{$nr} = 1; |
1114 | } |
1115 | } |
1116 | } |
1117 | $check = $more; |
1118 | } |
1119 | return keys %found; |
1120 | } |
1121 | |
e1083e99 |
1122 | =head2 rebuild_equivalence |
1123 | |
1124 | (Re)build the equivalence graph from scratch. Dumps the graph, makes a new one, |
1125 | adds all readings and edges, then makes an equivalence for all relationships. |
1126 | |
1127 | =cut |
1128 | |
1129 | sub rebuild_equivalence { |
1130 | my $self = shift; |
1131 | my $newgraph = Graph->new(); |
04482188 |
1132 | # Set this as the new equivalence graph |
1133 | $self->_reset_equivalence( $newgraph ); |
1134 | # Clear out the data hashes |
1135 | $self->_clear_equivalence; |
1136 | $self->_clear_eqreadings; |
1137 | |
b6f13859 |
1138 | $self->collation->tradition->_init_done(0); |
04482188 |
1139 | # Add the readings |
e1083e99 |
1140 | foreach my $r ( $self->collation->readings ) { |
04482188 |
1141 | my $rid = $r->id; |
1142 | $newgraph->add_vertex( $rid ); |
1143 | $self->set_equivalence( $rid, $rid ); |
1144 | $self->set_eqreadings( $rid, [ $rid ] ); |
e1083e99 |
1145 | } |
04482188 |
1146 | |
1147 | # Now add the edges |
e1083e99 |
1148 | foreach my $e ( $self->collation->paths ) { |
04482188 |
1149 | $self->add_equivalence_edge( @$e ); |
e1083e99 |
1150 | } |
04482188 |
1151 | |
1152 | # Now equate the colocated readings. This does no testing; |
1153 | # it assumes that all preexisting relationships are valid. |
e1083e99 |
1154 | foreach my $rel ( $self->relationships ) { |
1155 | my $relobj = $self->get_relationship( $rel ); |
1156 | next unless $relobj && $relobj->colocated; |
1157 | $self->_make_equivalence( @$rel ); |
1158 | } |
b6f13859 |
1159 | $self->collation->tradition->_init_done(1); |
e1083e99 |
1160 | } |
1161 | |
56772e8c |
1162 | =head2 equivalence_ranks |
1163 | |
1164 | Rank all vertices in the equivalence graph, and return a hash reference with |
1165 | vertex => rank mapping. |
1166 | |
1167 | =cut |
1168 | |
1169 | sub equivalence_ranks { |
1170 | my $self = shift; |
1171 | my $eqstart = $self->equivalence( $self->collation->start ); |
1172 | my $eqranks = { $eqstart => 0 }; |
1173 | my $rankeqs = { 0 => [ $eqstart ] }; |
1174 | my @curr_origin = ( $eqstart ); |
1175 | # A little iterative function. |
1176 | while( @curr_origin ) { |
1177 | @curr_origin = $self->_assign_rank( $eqranks, $rankeqs, @curr_origin ); |
1178 | } |
1179 | return( $eqranks, $rankeqs ); |
1180 | } |
1181 | |
1182 | sub _assign_rank { |
1183 | my( $self, $node_ranks, $rank_nodes, @current_nodes ) = @_; |
1184 | my $graph = $self->equivalence_graph; |
1185 | # Look at each of the children of @current_nodes. If all the child's |
1186 | # parents have a rank, assign it the highest rank + 1 and add it to |
1187 | # @next_nodes. Otherwise skip it; we will return when the highest-ranked |
1188 | # parent gets a rank. |
1189 | my @next_nodes; |
1190 | foreach my $c ( @current_nodes ) { |
1191 | warn "Current reading $c has no rank!" |
1192 | unless exists $node_ranks->{$c}; |
1193 | foreach my $child ( $graph->successors( $c ) ) { |
1194 | next if exists $node_ranks->{$child}; |
1195 | my $highest_rank = -1; |
1196 | my $skip = 0; |
1197 | foreach my $parent ( $graph->predecessors( $child ) ) { |
1198 | if( exists $node_ranks->{$parent} ) { |
1199 | $highest_rank = $node_ranks->{$parent} |
1200 | if $highest_rank <= $node_ranks->{$parent}; |
1201 | } else { |
1202 | $skip = 1; |
1203 | last; |
1204 | } |
1205 | } |
1206 | next if $skip; |
1207 | my $c_rank = $highest_rank + 1; |
1208 | # print STDERR "Assigning rank $c_rank to node $child \n"; |
1209 | $node_ranks->{$child} = $c_rank if $node_ranks; |
1210 | push( @{$rank_nodes->{$c_rank}}, $child ) if $rank_nodes; |
1211 | push( @next_nodes, $child ); |
1212 | } |
1213 | } |
1214 | return @next_nodes; |
1215 | } |
1216 | |
359944f7 |
1217 | ### Output logic |
1218 | |
027d819c |
1219 | sub _as_graphml { |
2626f709 |
1220 | my( $self, $graphml_ns, $xmlroot, $node_hash, $nodeid_key, $edge_keys ) = @_; |
c84275ff |
1221 | |
1222 | my $rgraph = $xmlroot->addNewChild( $graphml_ns, 'graph' ); |
1223 | $rgraph->setAttribute( 'edgedefault', 'directed' ); |
1224 | $rgraph->setAttribute( 'id', 'relationships', ); |
1225 | $rgraph->setAttribute( 'parse.edgeids', 'canonical' ); |
cc31ebaa |
1226 | $rgraph->setAttribute( 'parse.edges', 0 ); |
c84275ff |
1227 | $rgraph->setAttribute( 'parse.nodeids', 'canonical' ); |
cc31ebaa |
1228 | $rgraph->setAttribute( 'parse.nodes', 0 ); |
c84275ff |
1229 | $rgraph->setAttribute( 'parse.order', 'nodesfirst' ); |
1230 | |
1231 | # Add the vertices according to their XML IDs |
2626f709 |
1232 | my %rdg_lookup = ( reverse %$node_hash ); |
cc31ebaa |
1233 | # my @nlist = sort _by_xmlid keys( %rdg_lookup ); ## CAUSES SEGFAULT |
826d8773 |
1234 | my @nlist = sort keys( %rdg_lookup ); |
414cc046 |
1235 | foreach my $n ( @nlist ) { |
c84275ff |
1236 | my $n_el = $rgraph->addNewChild( $graphml_ns, 'node' ); |
1237 | $n_el->setAttribute( 'id', $n ); |
2626f709 |
1238 | _add_graphml_data( $n_el, $nodeid_key, $rdg_lookup{$n} ); |
c84275ff |
1239 | } |
cc31ebaa |
1240 | $rgraph->setAttribute( 'parse.nodes', scalar @nlist ); |
c84275ff |
1241 | |
1242 | # Add the relationship edges, with their object information |
1243 | my $edge_ctr = 0; |
1244 | foreach my $e ( sort { $a->[0] cmp $b->[0] } $self->graph->edges ) { |
1245 | # Add an edge and fill in its relationship info. |
a30ca502 |
1246 | next unless( exists $node_hash->{$e->[0]} && exists $node_hash->{$e->[1]} ); |
c84275ff |
1247 | my $edge_el = $rgraph->addNewChild( $graphml_ns, 'edge' ); |
1248 | $edge_el->setAttribute( 'source', $node_hash->{$e->[0]} ); |
1249 | $edge_el->setAttribute( 'target', $node_hash->{$e->[1]} ); |
1250 | $edge_el->setAttribute( 'id', 'e'.$edge_ctr++ ); |
1251 | |
3ae5e2ad |
1252 | my $rel_obj = $self->get_relationship( @$e ); |
bbd064a9 |
1253 | foreach my $key ( keys %$edge_keys ) { |
1254 | my $value = $rel_obj->$key; |
1255 | _add_graphml_data( $edge_el, $edge_keys->{$key}, $value ) |
1256 | if defined $value; |
1257 | } |
c84275ff |
1258 | } |
cc31ebaa |
1259 | $rgraph->setAttribute( 'parse.edges', $edge_ctr ); |
c84275ff |
1260 | } |
1261 | |
1262 | sub _by_xmlid { |
2626f709 |
1263 | my $tmp_a = $a; |
1264 | my $tmp_b = $b; |
1265 | $tmp_a =~ s/\D//g; |
1266 | $tmp_b =~ s/\D//g; |
1267 | return $tmp_a <=> $tmp_b; |
c84275ff |
1268 | } |
1269 | |
1270 | sub _add_graphml_data { |
1271 | my( $el, $key, $value ) = @_; |
1272 | return unless defined $value; |
1273 | my $data_el = $el->addNewChild( $el->namespaceURI, 'data' ); |
1274 | $data_el->setAttribute( 'key', $key ); |
1275 | $data_el->appendText( $value ); |
83d5ac3a |
1276 | } |
1277 | |
c7bd2768 |
1278 | sub dump_segment { |
1279 | my( $self, $from, $to ) = @_; |
1280 | open( DUMP, ">debug.svg" ) or die "Could not open debug.svg"; |
1281 | binmode DUMP, ':utf8'; |
1282 | print DUMP $self->collation->as_svg({ from => $from, to => $to, nocalc => 1 }); |
1283 | close DUMP; |
1284 | } |
1285 | |
63778331 |
1286 | sub throw { |
1287 | Text::Tradition::Error->throw( |
1288 | 'ident' => 'Relationship error', |
1289 | 'message' => $_[0], |
1290 | ); |
1291 | } |
1292 | |
22222af9 |
1293 | no Moose; |
1294 | __PACKAGE__->meta->make_immutable; |
1295 | |
1296 | 1; |